Lottia gigantea (owl limpet): LOTGIDRAFT_229414
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Entry
LOTGIDRAFT_229414 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K13217
pre-mRNA-processing factor 39
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_229414
Spliceosome [BR:
lgi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
LOTGIDRAFT_229414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_15
DNER_C
TPR_16
RGCC
T7SS_EccA1_N
SRP-alpha_N
SPO22
HAT
zf-C2H2_12
Mob1_phocein
Motif
Other DBs
NCBI-GeneID:
20247993
NCBI-ProteinID:
XP_009063636
JGI:
229414
UniProt:
V4B951
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MDQLETTEKKVNKMEEMNTTNAGEDKLDDLTEVITVKSNDSDGSKEVYNRVEEPKEVAEE
SKVTSGANKVTEKANNVSGKAKEANNVTLEANKVSSEADNVSSEANKMTEADDKLGEEGK
EVAEEGKEVIEEKKEDKVETELDKYWKAVNDNPTDFTGWTYLLQYVEQEGNIEWAREAYD
AFFKHYPYCYGYWKKYSDLEKQHNNVERAREIYERGVVGIPLSIDLWLHYINFYIMEYGT
QPESEDYIRLLYERAVSAAGTEFRSDKLWDSYVTWETSKNKLKNVTRIYDKIFTIPTQLY
SHHFDSFKNHIMKHHPKETVELDEFLRLRQEVVRQAKDDHVDDGGGEDVSTTTDAPPGTT
IDAPPGVEDTQSSLGDKEEASKIQEKIILLREIIYKENENEVSKRWAFEEAIRRPYFHVK
PLERSQLKNWREYLDFEIANGSHERVVVLFERCIIACGLYEDFWIKYTKYLEQHSVMGVR
NVYKRVCQIHLPKKPYIHLAWAAFEERQENYAEASEILRNIEKNVNGLVMVALRRISLER
RRGNYNDVEELFEEYIRSADSNASRSFFSIKFARYLQKIRGNTPKARTVLKEALAHDEKN
EKLFMQLLDVEYQCNPVEIDNVMELFNKAFNGDLPKSTKVKLSQRRMEFLEDFGTCIKKI
SKAYDEHQKLVKDMTSESKKRSSIGKSESPDEKKVKVDSNGTSDSVSRSHTTQPTIVTNT
NSTYDYNWDAYHNSGYPYQYYTPGYGYYQQHYGSSY
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattggaaacaacagaaaagaaagtaaacaaaatggaagagatgaataccaca
aatgcaggagaagacaaattggatgatctgacagaagttataacagttaaatcaaatgac
tcagatggatcaaaggaagtttacaatagagttgaggagcctaaagaagtggctgaggaa
tctaaagttacttcaggggctaacaaagtgactgagaaagccaacaatgtttctggaaaa
gctaaagaagccaacaatgtgactttagaagctaacaaagtgtcttcagaagctgacaat
gtatcttcagaagctaacaaaatgactgaggcagatgacaagttgggtgaagaaggtaaa
gaagtggctgaagaaggtaaagaagtgattgaagaaaagaaagaagacaaagtggagaca
gaattagataagtattggaaagctgttaatgataatcctacagattttactggctggaca
tatttattacaatatgttgaacaagagggtaacattgagtgggcaagagaagcttatgat
gctttctttaaacattatccttattgttatggctattggaagaaatacagtgatttagaa
aaacaacataataatgtagaacgagctagagagatttatgagcgtggtgttgttggaata
cctctatctatagatctatggttacattatattaatttctatataatggaatatggtact
caacctgaatcagaagattatattagattattgtatgaaagagctgtatctgctgctggt
actgaatttagatcagataaattatgggattcttacgttacctgggagaccagtaaaaac
aaactgaagaacgtaactcgaatatatgacaaaatatttaccattccaacacaactttac
agccaccattttgacagttttaagaaccatataatgaaacaccatcctaaagaaacagta
gagcttgatgaatttctcagattgagacaagaagtggttagacaggctaaagatgatcat
gttgatgatgggggtggggaggatgtttcaactactacagatgctccaccaggtaccact
attgatgcacctcctggagttgaagatacacagtctagtttgggagataaagaagaagct
agtaagatacaagagaaaattatattactaagagaaattatatataaagaaaatgaaaat
gaagtcagtaaaagatgggcatttgaagaagcgattcgtcgaccatatttccatgttaaa
cctttagaacgatctcaattaaagaattggagagaatatttagattttgagatagctaat
ggttctcatgaaagagttgtagtattatttgagagatgtataatagcttgtggtctatat
gaagatttctggataaagtatacgaagtatttagaacaacatagtgtaatgggtgtaaga
aatgtttataagagagtatgtcaaatacatctaccaaagaaaccttatatacatctagcc
tgggcagcatttgaagaaagacaagaaaattatgctgaagcaagtgaaatattaagaaat
atagagaagaatgtgaatggattagttatggtagctttaagaagaattagtttagagaga
agaagaggaaattataatgatgtagaagaattatttgaagaatatataagatcagcagac
tccaatgcctctagatctttcttctctataaaatttgctagatatttacaaaagataaga
ggaaatacacctaaagccagaacagtattaaaagaagctttagctcatgatgaaaagaat
gagaagttatttatgcagttattagatgtagaatatcagtgtaatccagtagagatagat
aatgtcatggaattatttaataaagcctttaatggtgatttacctaaatctactaaagtc
aaattgtctcaaagaagaatggaatttctggaggattttggaacttgcatcaaaaaaata
tctaaagcttatgatgaacatcagaaattagttaaagatatgactagtgaatctaaaaaa
cgctcttcaattggcaaaagtgaaagtcctgatgaaaagaaagtaaaagtagacagtaat
ggtaccagtgattcagttagtagatctcatactacacaaccaactatagtaactaatact
aatagtacctatgattataactgggatgcctatcataatagtggttatccataccagtat
tatacaccaggttatggttattatcaacaacattatggatcatcttattga
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