Lottia gigantea (owl limpet): LOTGIDRAFT_229906
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Entry
LOTGIDRAFT_229906 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K22555
TBC1 domain family member 23
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_229906
Membrane trafficking [BR:
lgi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
LOTGIDRAFT_229906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBC1D23_C
RabGAP-TBC
RabGap-TBC_2
Rhodanese
Motif
Other DBs
NCBI-GeneID:
20248142
NCBI-ProteinID:
XP_009044301
JGI:
229906
UniProt:
V4BFV4
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MDFKAQNSTITASRNICKGRPVPEHLRAEIWQICLNVEGKADSISSFDGFFDMAEQSLLR
SDCTALVDKLGNDEEDKVSVVSDLESIITFYCKSRNVKYSTNNGWLDILQPLLSLKLSKA
ELYNCFYAIVAKYIPQDCVKNGKPFHLFRLLLQYHDPEIASYLDTKRITPDSYIKNWFTS
LFASACDLKVITKMWDVYFQHSDPFLIFFMSLVILVNARDIILLSDESKPNLIETMSMFP
SGLEADDIEDFCALAQYYYNKTPQSFKWDYQSILFGNKLIQGKSSLVDQASQALCLPVSI
SELLEANQQAVTEESVRYFVVDCRPAEQYNNGHLSTAFHLDANLMLQNPVEFNTAVHALF
AAQQMAIAAGSVAGGEHLCFMGSGREEEDQYVFMVIAHFLQKGHQYICSCQGGFAALHEK
LKDNLSNEIADHNAKRCIVCNPDSTSSTSELDNTDDFKDSGKDSSLFGKLSNVMKSKSAE
YKEKLTNYIKNDQISGERHVSNTDKVGKRYRNMASVFTIGDDEEGEEGSYGGSSDDEPRE
VVSLETWLHKPDLIYHCKCKEIKANGYMYPSYMLIVNSHLYLLREIPKEKNMVYIQSRRA
LGSIVKITSKKRHPELITFKYGTSEDDGLKITDMDRFLIPTAGDAMRIVKSQIMKVLDAL
DS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaggctcaaaattcaactattactgcatcaaggaatatatgtaaaggaagg
ccagttccagaacacctacgggctgaaatctggcagatatgtttaaatgtggaaggcaaa
gctgattcaatttcatcctttgatggattttttgacatggcagaacaaagtttattgaga
tcagattgtacagccttagtagataaattgggtaatgatgaagaagataaagtatcagtt
gttagtgatttagaatctatcatcacgttttattgtaaatcacgtaatgttaaatactct
accaataatggatggttagatatcttacaacctctactctctcttaaattatctaaagcc
gaactctacaactgtttttatgcaatagttgctaaatatattcctcaagattgtgtgaag
aatggtaaaccatttcatttattccgtttgttgttacaatatcatgatcctgaaatagct
tcatatttagatacaaaacgtatcacacctgattcttatattaaaaactggttcacaagt
ttatttgcttcagcctgtgatttgaaagtgataactaagatgtgggatgtttattttcaa
cattccgatcctttcctgatatttttcatgtctttggtaatattagttaatgccagagat
attatactactatcagatgaaagcaagccaaatttaatagaaaccatgtcaatgtttcct
agtgggttagaagcagatgatattgaagatttctgtgctctggctcaatattattataat
aaaacaccacaatcttttaaatgggattatcagagtatattatttggtaataagttaata
caaggtaaatctagtttagtagaccaggcatcacaagccctatgtttacctgttagtatc
agtgaattgttagaagctaaccaacaagctgtgacagaagaaagtgtacgatattttgtg
gtagattgtagaccagcagaacaatataataatggtcatctttcaactgcttttcacctt
gatgccaatttgatgctacagaatccagtagaatttaatacagcagtacatgcattgttt
gctgcacaacaaatggcaatagctgcaggttcagtagctggaggagaacatctatgtttt
atgggaagtggtagggaagaagaagatcagtatgtatttatggttatagctcatttctta
cagaaaggtcatcaatacatctgttcttgtcaaggaggatttgcagcattacatgaaaag
ttaaaagacaacctatcaaatgagatagctgaccataatgctaaaagatgtattgtatgt
aatcctgattctactagcagtacatcagagttagataacactgatgattttaaagattct
ggtaaagattcatcattatttggtaaattatctaatgttatgaagagtaagtctgctgaa
tataaagaaaaattaacgaattatattaaaaatgaccaaataagtggggaaagacatgtt
agtaatacagataaagttggtaaaagatacagaaatatggcctcggtttttactataggt
gatgatgaagaaggtgaagaaggtagttatggaggatcatctgacgatgaacctagagaa
gtggttagtttagaaacctggttacataaaccagatctaatctaccattgtaaatgtaag
gaaatcaaagccaatggttacatgtatccaagttacatgttaattgttaattcccacctg
tatcttttacgtgaaattcctaaagagaagaatatggtgtatattcaatcacgacgagct
ctaggcagcattgtcaaaatcacatctaaaaagagacacccagaattaattacctttaaa
tatggtaccagtgaggacgatggattgaaaattaccgacatggacagattcctcattcct
actgctggtgatgccatgaggatcgtcaaatcccaaattatgaaagtgcttgatgcttta
gacagttaa
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