Lottia gigantea (owl limpet): LOTGIDRAFT_229978
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Entry
LOTGIDRAFT_229978 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_229978
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
LOTGIDRAFT_229978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
20248163
NCBI-ProteinID:
XP_009044408
JGI:
229978
UniProt:
V4AL38
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MSKPKRRVTVEHENSDDDQHKPSVFERLGPGARPRKYAESNERPIVCRNWQANSTCFFGT
KCKFSHPQSLAKSRRSQSPDNRRRGRSSRSRSRSSSRSRSHSQSRSRSESQSRRPERTTN
RTEKMKSAVVVRKAKQFEAEEDSEDSGSWNLDKLDYKKELELEKKRQQLQRELSQLAGSE
EEQDNIKIQKRIGKNHSDSDSSPERPKVTKKVSKVSPFKMKLDKKNKLKPSPMVLAAVKQ
RPPSPQRGAKKEAKKKSIGGSDDEDSPRAKLKKASKLAMKIMAEKAAEAETIMKKKKHSP
RADKKGDKVRVSRFSDATSPLKKHKSRSPGHRSRSSSSPSPVKKKTVSPKGKDKGKAKKK
KAELPVSFDRRSLSPKRKSRSISKGRRGKGSKKKYDSSSSSDSSSSSSTSPDVKRKKRPS
NKSKEREKDSLKKGKKGRKKSSESPPPLKRGSPPPRPSRREPSPDKRRRDEEPPRRFERG
SPDSLRSHSSSPGRNRGRGRHQSPDERRRRDRDEMMKKRPERSPEERRGREEGRRPDPRE
EGRRQDVRDDSRRPDPRDEMRRPDEREDRRRDMSREGREEMRREVRDDPRRMDGRDEPRR
EMREDMRRERGDNRDDPRRPDRDEIRRERNLDPRRPERDEFDRGDLRDPRDELRRPEFDH
RRSPPIPRRSLSPDLRRDRPGRPQEFRPSPVERGRYETFPDRFDPDRRLERDVYVPRDRR
LDPGFDRERDHLDRFPPERPPLRDDPRRSPPPYERPAYRDPAWDRGRGRGWRGRGRGLEA
PRSRYVPPPTYVRGRYAAEREPIGRGGRREWDEWEARHDERLDIPPREFDRRFDDRMLRD
EGRPREPWPPRDDRRPDFRDERLDRRDISPFRRRPEDRTRDPSFDRGREMRDREEGPRMD
RDGSRDRGREDFRGRDDDRRGPPRDELGRRREDRDDTRSERSMDSRRDPGRLAPDDATGD
RASRSGDRPAEGGRLRDDGSPKSERRATSRHSEDRGSHIERESRASERGRPRDEDGKDRD
DKSKDGEGSLSRKRHNDEEDKKSTGSSPAHKKPRDNSPARSQRSVGSAGARSLSSRSRIR
TRGEELKKEDRRSRSGSHGRRRDVPDRPEEAKSEKGDNQSEKPLPKRSRSLSNEKEAGVD
DVKRQKTSEDDTPQLPEDNLGVPDFEGQFSPDHKSDRSFAADSPPDQPPESLDQSKEVFS
DWSDDDADEILIQSWDQSKVVFSDRSDDDADEILIQEPAIRSIKEEERRRRSLSRSSRGS
KTSRHDDKKSERGGEKGPDPEPQERPRVDSLESGALNKPESTVSDDLTKKDLDGIDDEAL
DYDSISSDEGSFLDEDGENKKKEKQSIVDVLDIDWSSLQTDTKPKPSTGSALNRFKPHNV
LKRLGVSREFAGEELYQKVQETIQKGQEEEATVNGEATEEGKEAEKPKFKFEHDVASFHC
AALSRFKERTNLFKSVGRFRRALCARKDLEMRRQLCKVDKRPGSSSLCPPRAVCADDFTY
RRRINGETVLMKRRIFNCRCDLTSREVCPISDETMLYASAINKQYLCQPISTLPRCNEEE
NPTRVAEEMEQNSPSFEYRNFYRINCVCPRHFTPMPQVLGTLQRATKYHRTEMDMVHFRI
FQQYICAV
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacctaaacgaagagtaactgtagaacacgaaaattcagacgacgaccagcac
aaacccagtgtttttgaaagacttggacctggggctcgacccagaaaatatgcagaatca
aatgagaggcctatagtttgtcgtaactggcaagctaacagtacatgtttttttggtacc
aagtgtaaatttagtcatcctcaatcactagctaaatctagaagaagccaaagtccagac
aatagaagacgtggtagaagttcaaggtcacgtagtagaagcagcagtcggagtcgtagt
cattctcagagtcgttcacggagcgagagtcagagtcgtcggccagagaggacaaccaat
cgtacagagaagatgaaatcagctgtagtggtacgaaaagcaaaacagtttgaggcagaa
gaagatagcgaagattctgggagctggaatcttgacaagttggattataagaaggaacta
gaactagaaaaaaaaagacaacagttacaaagagagctgagtcaactagctggttcagag
gaggaacaggataatattaaaatacagaaaaggattggtaaaaatcattctgattcagac
tcaagtcctgaaaggcctaaagtaacaaagaaggtttctaaagtatctccttttaaaatg
aaattggacaagaagaataagttaaagccatcacccatggtcctggctgccgtcaaacaa
cgacctcctagtcctcagagaggggcgaagaaggaggcaaaaaagaaatcaattggaggg
agtgatgatgaagacagcccacgagccaagttaaagaaagccagcaagctagctatgaaa
ataatggcggagaaggctgctgaggcagaaaccattatgaaaaagaagaaacattcccca
cgagctgacaaaaagggtgacaaagtccgtgtaagcagattctcagatgcgacatcgccg
ctgaagaaacacaagtcaaggtcaccaggtcatagatcaaggtcatcctcgtctccatcg
ccagttaaaaagaagactgtatctcctaaaggaaaggataagggtaaagctaagaaaaag
aaggctgaacttcctgtgtcatttgatcgcaggtccctttctccaaaaagaaagagcaga
tcaatcagtaaaggcaggagaggcaagggaagcaagaaaaagtatgactcatcctccagc
tcggactcttcgagttccagctcaaccagccctgacgtcaaaagaaagaaacgcccatcc
aataagagtaaggaacgagaaaaggattcattgaagaagggaaagaagggtcgaaagaag
agctctgagtcaccaccacctctgaaaagaggttcccctcctccaagaccctctagaaga
gaacccagcccagataaacgcagaagagatgaagaacctcccagaagatttgaaagaggt
tctcctgattctttgcgatctcattcatcttcacctggacgtaatcgtggaagaggtaga
caccagtcgccagacgagaggcgtaggagggacagagatgagatgatgaagaaaagacca
gaaagatccccagaggaacgtaggggtagagaagagggtagacgtcctgaccccagagaa
gaagggcggcgtcaagatgttcgtgacgattcaagacgacctgatccaagggatgagatg
cgaagacctgatgaacgagaagacagaaggagggatatgagcagagaaggacgtgaagag
atgcgccgagaggtccgcgatgatcctcggaggatggatggacgtgatgaacccagacgg
gaaatgagagaggacatgagaagagaaaggggagacaatagagatgaccctagaagacca
gaccgagatgagattcgcagagaacgaaatctggaccctcgtagaccagagagggatgaa
ttcgacagaggtgatttgagagatccacgagatgagctcagacgacctgagtttgatcac
agaagatctccaccaattcccagaagatcattgtctccagatttgagacgggacaggcct
gggcgtcctcaagagttccgaccaagccctgtagaacgaggcaggtacgaaaccttcccg
gatagatttgacccagacagaagacttgaaagagatgtctatgttcccagagacagaaga
ctggatcctggatttgacagagaaagagatcatttggatagattcccacctgaaagacct
cccttgagagatgaccccagaagatcacctccaccctatgaaagaccagcatatcgagat
cccgcctgggatagaggacgaggcagaggatggagaggaagaggtcgtggcctggaggca
ccaagaagtcgctatgttcctccaccaacctatgtacgaggtcgttatgcagcagaaaga
gaacccattggcagaggtggcaggagagaatgggatgaatgggaggcaagacatgatgaa
cgcctcgatatccctcctcgcgagttcgaccgacgattcgatgacagaatgcttagagat
gagggcagaccacgagaaccttggccacctcgagatgacagacgtccagattttagagat
gaaagactcgatcgtagagacatctcgccatttagacgacgtcctgaggacaggaccaga
gatccaagttttgacagaggtcgcgaaatgagagatcgagaagaaggtcctcgtatggac
agagatggttctcgtgacagaggtagagaagattttcgaggacgtgatgatgacagacgt
ggacctccaagagatgaactcggaaggagaagagaggaccgcgatgatactagatccgaa
agaagtatggattcacgacgagatcctggacgacttgctcctgatgatgctactggtgat
cgagcatccaggtctggtgatcgtcctgccgaaggtggacgtctaagagatgatggtagt
cctaaaagtgaacgtagagctacctccagacattctgaagatagaggcagccatattgaa
cgagagtccagagctagtgaaagaggacgccccagagatgaggatgggaaagaccgagat
gacaagtctaaagatggtgaaggcagcttgtcaagaaagcgtcataatgacgaagaagac
aagaagtccactgggagttccccagctcataaaaaaccaagagataactctccagccaga
tctcagagaagtgtaggaagtgctggagccaggagtctgtccagccgctcaaggatcagg
actcgaggggaggagctaaagaaggaagaccggagaagtaggagtggcagccatggcaga
cgaagagatgttccagataggcctgaagaagcaaaatcagaaaagggagataaccaatct
gagaaacctctgcccaaacgctccagatcattgtccaatgaaaaagaagccggtgttgat
gatgtaaaaaggcagaagacctcagaagatgacacccctcaactgccagaagataatctt
ggagttcctgattttgagggtcagttttcaccagaccataaatctgacagatcctttgct
gcagatagtccaccagaccagcctccagagtctctggaccagtccaaggaggtcttcagt
gactggtctgatgatgatgcagatgagatcctaatccagtcttgggaccagtccaaagtg
gtcttcagtgaccggtctgatgatgatgcagatgagatcctgatccaggaaccagccatc
cgaagtatcaaagaagaggaaagaagaagacgcagtctgagtagaagtagtcgtggcagc
aaaacaagtcgtcatgacgataagaaatcggaacgaggtggagaaaagggacctgaccca
gaaccacaagaaagaccaagagtagactcgttagaatctggtgctctaaacaaaccagaa
tcaaccgtttctgatgatctcactaagaaagatttggatggaatagatgatgaagctcta
gattatgattctatctcatctgatgaaggaagttttctggatgaggatggtgagaataag
aagaaggaaaaacaaagcattgtggatgttcttgatattgactggtcaagcttacaaact
gacaccaaaccaaaaccgtcaaccggttcagctttgaatcgtttcaaaccgcacaatgtg
ctgaaacgtctaggggtgtctagagagtttgctggagaagaattgtatcagaaggtacaa
gagacgattcagaagggacaagaagaggaagctactgtaaatggtgaagctacagaagaa
ggtaaagaagcagagaaaccaaaattcaaatttgagcatgatgtggcttcattccactgt
gcagctttatcaaggtttaaagaacgaactaatctttttaaaagtgttggacggttccgt
agagcgttgtgtgctcgtaaagatttggagatgcgaagacagctgtgcaaagtagataag
aggccaggatccagctcgctatgtccaccacgagcagtatgtgctgatgacttcacctat
agaagaagaatcaacggcgaaaccgttctgatgaagaggcgaatcttcaactgtcgctgt
gacctcacttcccgagaggtctgccccatttctgacgagaccatgctctacgcaagcgca
atcaacaagcagtatttgtgtcaaccaatttccaccttaccaagatgtaacgaagaagaa
aatcctacaagagttgccgaggaaatggaacaaaattcaccatcgttcgagtacagaaac
ttctataggatcaactgtgtctgccctcgtcattttaccccaatgccccaagttcttggc
acattacagagggcaaccaaatatcaccgaacagagatggatatggtccattttagaatt
ttccagcaatatatctgtgcagtttaa
DBGET
integrated database retrieval system