Lottia gigantea (owl limpet): LOTGIDRAFT_230203
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Entry
LOTGIDRAFT_230203 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgi03016
]
LOTGIDRAFT_230203
Enzymes [BR:
lgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LOTGIDRAFT_230203
Transfer RNA biogenesis [BR:
lgi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LOTGIDRAFT_230203
Prokaryotic type
LOTGIDRAFT_230203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
20248228
NCBI-ProteinID:
XP_009045372
JGI:
230203
UniProt:
V4CND6
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MGLKLGTSGESFVLCKFHKIQTRTYSLKSGKVIPSETWYGEQKKKTKSSKVKEDQKISQT
DDIISQKASDSIDVHIVGKGSKGFSRAVVINTTSTRYLFNCGEGIQRFFMVDKLKIAKIE
HLFLTSNSWSNIGGLIGLLFMLENIGVPKITLHGPPNVEGISSMCKHLGQSDGTKLEKRL
LTEGNYEDNNFKFQYVPFFRKKEKTDEAAFASKKPKLDSLPVEVSVAYICTPKPSIRRID
IQKCIELDIAPGPCLNLVKTGESVTLEDGRVINSEDILKPLVQSPSFIKCSHSGFLTPLI
NNEGLKKYQNTDENTPVEMTVDLIIHLTPEHIVKLPEYQQWINSFGANVKHMIFEDTFSN
VMDDEGSKIQSHLNLLHPELFPLLPALTTPTSTLPDMTSNIITGENNLKYHYKPYTQLSR
ELITQPNLEDFQSEITRNPEITEAIDNFKQEVAKLKSEIPKDDRVYPEIVFLGTGASTSS
KFRNFSGILLRLDDSKSIMLDCGEATISQLYDHYGEKTDSILRTLNGVFISHMHADHHLG
LCGIIQARLDAFGKEKKDIPRLIVAAPSSMKRWINYIDGRIYPVSAAIKFFPLQRLKLED
KLNIAKLLNLDDFNPVDVNHCLGAKGLCLKYNGFKLVYSGDTMPCNNLVRHGKDCDILIH
EATFDEGMEKEAKFKMHSTTTQAIEIGQKMKAKQIILTHFSQRFKKVPNFTNIHTSNVSI
AFDHMTVRPCDYPYLSLLLKPLAVMFEDAIKINNIIKMKRTQKDALKLESEAAQVKSHSS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggggttaaaacttggaacgtcaggtgaatcgtttgtcctctgcaaatttcataagata
caaacaagaacttactcccttaagagtggtaaagtaatacccagtgaaacatggtatggt
gaacagaaaaagaaaacaaaatcaagtaaagttaaagaagaccagaaaatttcacagaca
gatgacataatatctcaaaaagcatctgactctattgatgtacatattgtggggaagggt
agcaaggggttttcgagagctgtagtcatcaacacaacatctacaaggtatctttttaac
tgtggtgaaggaattcaaagatttttcatggtagacaaattgaagattgccaagatagaa
catctttttctgaccagtaatagttggagtaacattggtggattaataggtttattattt
atgttagaaaacataggtgtacccaaaataactcttcatggaccccctaatgtggagggt
atatccagtatgtgtaaacatttaggacagtcagatgggacaaaattagaaaagagattg
cttactgaaggaaattacgaagacaataacttcaagtttcaatacgtaccattctttcgt
aaaaaagaaaagactgatgaagcagcgtttgccagtaaaaaacccaagttagacagtcta
cctgttgaggtttccgtagcctatatctgtacacctaaaccctcgataaggagaatagat
attcagaaatgcatcgaattggatattgctccaggtccatgtttaaatttggtcaaaact
ggtgaatcagtaacattagaagacggaagagtgattaattctgaagatattttaaagcca
cttgttcaatctccttcatttatcaaatgttctcactctgggtttttaactccattgatt
aataacgaaggattgaaaaaatatcaaaacacagatgaaaatacaccagtagaaatgaca
gttgatttaattattcacctaactccagaacatatagtaaaattacctgaatatcaacaa
tggatcaacagttttggagcgaatgttaaacatatgatatttgaagatacgttcagtaac
gtcatggatgatgagggctcaaaaatacaaagccacctcaatttactccatcctgagtta
ttccccttgttaccagcattgaccacgcccacctcgactctacctgatatgactagtaat
attattacaggggaaaataacttgaagtatcattataaaccatatacacaattatcaaga
gagttaataactcagccaaaccttgaagatttccagagtgaaataacaagaaatcctgaa
attactgaagcaatagataattttaaacaagaggtcgctaaattaaaatcagagattcct
aaagatgatcgagtgtatccagagattgtatttttaggtactggagcctcaacatcatca
aagttcagaaattttagtggaattctgttacgtttagatgacagtaagagtataatgtta
gactgtggtgaagctactataagtcagttatatgatcattatggtgaaaaaacagactct
atattacgtactcttaatggtgtatttatatcacatatgcatgctgatcatcatttaggc
ctttgtggtattatacaggctaggctagatgcgtttggaaaagaaaagaaagacatccct
cgtttaatcgtagctgctccatcatcgatgaagaggtggataaattatattgatgggaga
atttatccagtttctgcagctataaagttttttcccttacaaagactgaaattagaagat
aaactgaatattgcaaaacttctcaaccttgatgattttaacccagttgatgtgaatcat
tgtctaggagctaaaggactgtgtttaaaatataatggttttaaattggtatattctgga
gatacaatgccttgtaataacttagttcgccatggaaaagattgtgatattttgattcat
gaagcaacatttgatgaaggaatggagaaagaggctaaatttaaaatgcacagtacaaca
acacaagctatagaaattggacagaagatgaaagccaagcagatcatattgacccatttc
agtcaaagatttaaaaaagtgccaaattttaccaatatacatacttccaatgtttccata
gcttttgatcatatgacggttcgaccgtgtgattatccctatctatcattgttattaaaa
cctctagcagtgatgtttgaagatgccatcaaaataaacaatattattaaaatgaaaagg
acccaaaaagatgctttgaaattggaatctgaggctgcacaagtcaagtctcatagcagc
tga
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