Lottia gigantea (owl limpet): LOTGIDRAFT_230870
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Entry
LOTGIDRAFT_230870 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
LOTGIDRAFT_230870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_230870
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
LOTGIDRAFT_230870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ipi1_N
TPR_TEX10
TOR1L1_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
20248408
NCBI-ProteinID:
XP_009049375
JGI:
230870
UniProt:
V4AY19
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MGKQKKNRQGADKTFQKKKVKVGKKLPKAANATKTSFKTKTIQIIQQLKKDQDQATTKRK
LNIKDLLSQCMHYNMTVRLGAAQGMKELLSVSEEPLIDNLGTVIDRAGSLMTDKDYTVRE
AVLKLFEPLFNTVSPLRMTPFFPVLCAHLCCAMTHINAEIQQDSLLLFDLLLKAYPDLIV
HSSNQLLSNFVEQISKQKFKNSSSGMRFGPSTKDSSKLSLSIAPNRQGSAQKWQSKVLNR
LLKLLTIVLKDEDNGIESQENVLRVTENENHFMPFQNFMKKNWLQPGFAVRTPGMVQTSA
VDLTDIQSIKQLVLNLFPLLIQCWVEAHDSEKNDGSLLYSEATSIRTTVLDIILLLIEYG
TKNSDSLDVLWSNWLSEQFEVTFVNYFTSSFPFELLHGKKNKNKKQKVAEVNISPENLNL
AVCSVMTKFIKTPSDFQQQSWIQPILKYIRYNIKTPDLALDIRRHLLQVLTSLIYAMRPN
DQLLIFEDCVYRYQRAHHLSQEKQMFIHYFAKVIFKSEGRSDLDRPLISFLDSLPDLLLE
VGQSNDAISTKIMSVIKNAVTSNITPVLKKWQSYIDLVYNIDTGVFLTSSKPLKKSMIEI
LYWLPALTKNQLKLFVNLIHHEGLEFEEGKYLIQVLQERFNKIIGEKINLDLIADQLGFL
MLVMLGPKHSGIVSDVSKPVTDWSVIEQHFWKKQLSLDTFICKILQADFLPYADLVSDVV
WSSLEKRKKNNLYTVLCLLSVLIKFPTSNISQDFTDLTITFACNLFSTEKTVESSLSSLY
TLLEDAVCQPYLKTFIEATAKMILNSADQETAVNLTKMINVLTQISSLKTLIMESSSTDK
GSYCGNLEKVTNFVQSKYSCVTNESWLSNLEYFTLQLK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacaaaagaaaaatcgccagggagcggataaaacgtttcagaagaagaaagtc
aaggttggaaaaaagctacctaaagcggcaaatgctaccaaaaccagtttcaaaaccaaa
acaattcagatcattcaacagttgaaaaaagaccaggaccaagccactaccaagcggaaa
ctgaatatcaaagatttgctgtcacaatgcatgcattacaacatgactgtcagattgggg
gctgctcaaggcatgaaggaattgctgtcagtaagtgaagagccgctgatagataattta
gggacagtcattgacagagcagggtctctcatgactgacaaggattatactgtgcgagag
gcagtactgaaattatttgagcctttattcaacacagtttcacctctgagaatgacccct
ttcttcccagtgttatgtgctcacctttgctgtgccatgacccacatcaatgccgagatc
caacaagactccttgctgctgtttgacctcttgttaaaagcttatccagatctgattgtc
cacagctccaaccaattgttgtcaaactttgttgagcagatttctaaacaaaaattcaag
aactctagcagtggcatgaggtttggaccctctaccaaagactcttcaaaattaagttta
tcaattgcaccaaacagacaaggttcagctcaaaaatggcagtcaaaagttctcaatcgt
ctattaaagttacttacaattgttttgaaagatgaagacaatgggattgaaagtcaagaa
aatgttttaagagtaactgaaaatgaaaaccattttatgccatttcaaaactttatgaag
aagaattggttgcagcctggttttgctgtgagaactccaggaatggttcaaacttctgca
gttgatctaacagatattcaaagcattaaacaactagtcttgaatctgtttccattgtta
attcagtgttgggtggaagctcatgattctgagaaaaatgatggcagcctcttatattca
gaagccacttcaattagaaccactgttctggacatcatcctgctattaatagaatatggt
accaaaaactctgattctttggatgttttgtggtctaactggttgtccgaacaattcgag
gtaacatttgtcaactattttacttccagtttcccttttgagctacttcatggcaaaaag
aataagaataagaaacagaaagttgctgaagtcaatatttctccagaaaatttaaaccta
gcagtttgtagtgtaatgaccaaattcatcaaaactccatcagattttcaacagcaatct
tggattcaaccaattctaaaatatattcggtataacattaaaacaccagatttagcatta
gatattcgtagacatttactacaggtcttaacttctcttatctatgcaatgagacccaat
gatcagctgttaatatttgaagattgtgtctacagatatcaaagagctcatcatctatct
caagaaaaacaaatgtttatccactattttgctaaagttatatttaaatctgagggtaga
tcagatcttgataggcctttgatttcatttttggattcgttgcccgatttgcttttggaa
gttggtcagtcaaatgatgccatttctacaaagataatgtcagttataaagaatgctgtg
acttcaaatattaccccggttttgaaaaaatggcaaagttacattgaccttgtgtacaac
attgacactggagtgtttttaaccagttccaaacctctgaaaaagtccatgattgaaatt
ttatactggttaccagctttaacaaaaaatcagttgaaattatttgtgaatttgatccac
catgaaggcttggaattcgaagagggaaaatatctgattcaagtgttgcaagaacgtttt
aataaaataattggtgagaagataaatttggatctcatcgctgatcagttaggattttta
atgctggtgatgcttggccctaaacatagtggtattgtttccgatgtaagcaaacctgta
actgattggtctgttattgaacagcacttttggaaaaaacaattatcacttgacactttc
atttgcaaaattttacaagcagattttctaccatatgctgacttggtcagtgatgttgta
tggagttctttagaaaaacgtaaaaagaacaatttgtacactgtgttgtgcttactttca
gttttgataaaatttccaacctcaaacatttctcaagatttcacagacttgacaattaca
tttgcatgtaatttattttcaacagaaaaaactgtagaaagttctttatcatctttgtat
actttgttagaggatgccgtatgtcagccatatttgaaaacatttattgaagcaacagct
aaaatgattttgaattctgcagaccaggaaactgctgttaatttgactaaaatgataaat
gttctgactcagatttctagtcttaaaactttgattatggagagttcatccacagataaa
ggaagttactgtggaaatttagagaaagttactaactttgttcagtctaagtactcatgt
gtaacaaatgaatcctggttatcaaatttagaatatttcactttacagttgaagtga
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