Lottia gigantea (owl limpet): LOTGIDRAFT_231845
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Entry
LOTGIDRAFT_231845 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03504
DNA polymerase delta subunit 3
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03030
DNA replication
lgi03410
Base excision repair
lgi03420
Nucleotide excision repair
lgi03430
Mismatch repair
lgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOTGIDRAFT_231845
03410 Base excision repair
LOTGIDRAFT_231845
03420 Nucleotide excision repair
LOTGIDRAFT_231845
03430 Mismatch repair
LOTGIDRAFT_231845
03440 Homologous recombination
LOTGIDRAFT_231845
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lgi01009
]
LOTGIDRAFT_231845
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgi03032
]
LOTGIDRAFT_231845
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_231845
Protein phosphatases and associated proteins [BR:
lgi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
LOTGIDRAFT_231845
DNA replication proteins [BR:
lgi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
LOTGIDRAFT_231845
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
LOTGIDRAFT_231845
MMR (mismatch excision repair)
DNA polymerase delta complex
LOTGIDRAFT_231845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
20248735
NCBI-ProteinID:
XP_009053252
JGI:
231845
UniProt:
V4AGV2
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MAGDAGANLLYLENLDEYVNDENKIVTYKWLSCTLQIHVNLAKRLLYLFLQQERNEKDND
LSVTYFVAGQHKDNNGNQKHICCVVPETELSTVKSRLSPVTSCHIYSVHKVKLKDTNALY
TTDYEKIKEDIYNACRGITCMKYICSKQDHAHNYFTPLAISCEKKENVTAPPSNMTNIKK
KPEPKGSIATMFGNTNKKTTVKSEIEETSSQNKTEKPKTQEKTNNKKDGMKAFFKPGEKK
GDDSFLDEKPKEDKKSPIKNQTQIQKDTNKSRNGKKKASSDAEDNRKNQTKRRRIKADLF
DSSSEEEMVISDEEELIPPTPPREASPVPSPRSPSPVKQLPDKQSPKKQNGEKRAANNNS
GERKRKRIKRLVNKTYKDEDGFMTTEKVYETDSTDVSDEEEPIPSKTQQKTPADTSSKHE
AQKKKSPPNKKQSPVKGKQMSLTSFFTKK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagatgctggtgccaatttgttatatttagagaatcttgatgaatatgttaat
gatgaaaataaaattgtgacatataaatggttaagttgtaccttacaaattcatgttaat
ttggccaagagattattatatttatttctacaacaagaaagaaatgagaaagataatgat
ttatctgtgacatattttgtagctggtcaacataaagataacaatggtaaccagaaacat
atttgttgtgtagtaccagagactgaactatctacagttaaatcaaggttatcaccagtt
actagctgtcatatctatagtgtacacaaagttaaactcaaggacactaatgccttgtat
accactgattatgaaaaaataaaagaagatatatacaatgcttgcaggggtataacttgt
atgaaatacatttgttcaaaacaggaccatgcacacaattacttcacccctttggccatc
tcgtgtgaaaagaaagaaaatgtgacggcaccaccatccaatatgaccaatataaaaaag
aaaccagaaccaaaaggaagtatagcaactatgtttggtaatactaataaaaagaccaca
gttaaatcagaaattgaagaaacatcttcacaaaataaaacagaaaaacctaaaactcag
gagaaaacaaacaataaaaaagatggaatgaaggctttctttaaacctggagaaaagaaa
ggcgatgattcatttttagatgaaaaacctaaagaagacaagaaatctccaataaaaaat
cagacccaaattcagaaagacacaaataaaagtagaaatggtaaaaagaaagctagtagt
gatgcagaagataatagaaagaatcaaactaaaagacgtagaataaaggctgatttattt
gacagtagttctgaagaagaaatggttatatcagatgaggaggagttaataccaccaaca
ccacctagagaagctagtccagttccctcacccagatcaccatcaccagttaaacaatta
ccagataaacaatcacccaagaaacagaatggtgagaaaagagctgccaataataatagt
ggtgagagaaaaagaaagcgtatcaaaagattagttaataaaacatataaggatgaagat
ggctttatgactacagagaaagtatatgaaacagattctactgatgtatctgatgaagaa
gaaccaataccaagtaaaactcaacagaaaacaccagctgatacttcttctaaacatgag
gcacagaaaaagaaatcaccacccaataaaaaacagtcaccagttaaaggcaaacagatg
tccttaacatcattttttacaaaaaaataa
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