Lottia gigantea (owl limpet): LOTGIDRAFT_232781
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Entry
LOTGIDRAFT_232781 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K12597
protein AIR1/2
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOTGIDRAFT_232781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_232781
03016 Transfer RNA biogenesis [BR:
lgi03016
]
LOTGIDRAFT_232781
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
LOTGIDRAFT_232781
Transfer RNA biogenesis [BR:
lgi03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
LOTGIDRAFT_232781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
20249044
NCBI-ProteinID:
XP_009056069
JGI:
232781
UniProt:
V4AE42
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MEDNLINHYDIESLCDSDREELEHALYSQIHYDTGDKSIDYTNYVYSPSFISTSTPQVSL
KTDEHGLLAGTLNNENCKIEKKAKGSPKHLKTDNEFILNHTAKDCKNSPKSSNEKKHVSS
DLKSKTLKQKLSESTVSSNNINIKNSKQKRVKLRNDMSDEDEKRESKYKLYSLHNRTKPS
HTATVIIDSDLENTGSDNSSVLTISDSDMSDSDSSSMCSKIFTKDSKLPDIQLNIDNDNS
DNGNDDIDDILSVADHSSSDEDDEDEKWHVSEQDILGSQPEIFRYYKYDAVKNVRCKNCR
EKGHLSRDCPKPKVIVCYLCGNRNHVSTACPEPLCYNCSQPGHISSECTQSQYKWYIKCS
RCDMPGHQHEYCPDNWRRFHVTTVGEPKEVKVKINPRKFCCNCGSYKHFGYKCNKPPMSS
HAQITYPFIVSYKPPVIKKQKLSTKKYFHDDDQVLEPVFKKKKIQLVGFDEKTRKEKNMK
IKPMKNIEMKSPDPLKNFKKIMKDYKSVEDKDNKNNKKKQKGQKLRNIREKSAFVKFAKK
SNLDDKLFLYTDKHLNRKNKVNSKNKFEKQGKKKKTRKGKKVI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaagataatttgataaaccactatgatattgagagtttatgcgattctgacagggaa
gaattagaacatgctctgtatagtcaaattcattatgatactggtgataaatctatagat
tatactaattatgtttatagccctagctttatttcaacttcaacacctcaagtttctctc
aagacagatgaacatggattgttagctggtactttgaataatgaaaactgtaaaattgaa
aagaaagcaaaaggaagtccaaaacatttaaagacagataatgagttcatcttgaatcac
acagcaaaagattgtaagaactctccaaaatcctcaaatgaaaagaaacatgtatcatcg
gaccttaaatctaagactttaaaacaaaagctaagtgaatcaactgtaagttccaataat
ataaatattaaaaactccaaacaaaagagagttaagttgagaaatgatatgtcagatgag
gatgaaaagagagaatccaaatataaattatatagcttacataataggactaaaccatca
cacactgcaaccgttattatagatagtgatttagaaaataccggtagtgataatagttca
gttttaactatatctgatagtgatatgagtgattcagacagttctagtatgtgtagtaaa
atatttaccaaggattctaaactgcctgatatacaattgaatatagataatgataatagt
gataatggtaatgatgatattgatgatatattatctgttgcagatcacagtagttcagat
gaagatgatgaagatgaaaaatggcatgttagtgaacaagatattttaggatctcagcca
gaaatatttagatattataaatatgatgctgtgaaaaatgtcaggtgcaaaaattgtcga
gaaaagggtcatttatcaagagattgtccgaaaccaaaggttatagtatgctatctatgt
ggtaacagaaatcatgtatctacagcctgtccggaaccattatgttacaactgttctcag
cctggtcatatatcatcagagtgtacacaatcacaatataaatggtatattaaatgttct
agatgtgatatgcctggacatcaacatgagtattgtcctgataactggagaaggtttcat
gttacaactgtaggagaacctaaagaagttaaagttaaaataaatcctagaaaattttgc
tgtaattgtggaagttataaacattttggctataaatgtaataaaccaccgatgtcaagt
catgcccagataacttatccttttatagtgtcatataaaccaccagtaattaaaaaacag
aaattatcaactaaaaaatacttccatgatgatgatcaggtactggaaccagtgtttaaa
aagaagaaaattcaactggtaggatttgatgaaaagaccaggaaagaaaaaaacatgaaa
ataaaaccaatgaaaaatatagagatgaaatcaccagatccattaaaaaactttaagaag
attatgaaagattataaaagtgtggaagataaagacaataaaaacaataaaaagaaacaa
aaaggtcaaaagttgagaaatattcgagaaaaatcagcttttgtgaaatttgcaaagaaa
tctaatcttgatgataaactatttctctatactgataaacatttaaatagaaaaaataaa
gtcaacagtaaaaataaatttgaaaaacaaggcaagaagaagaaaactagaaaaggaaag
aaagttatttaa
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