Lottia gigantea (owl limpet): LOTGIDRAFT_235540
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Entry
LOTGIDRAFT_235540 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K13114
pinin
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03013
Nucleocytoplasmic transport
lgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LOTGIDRAFT_235540
03015 mRNA surveillance pathway
LOTGIDRAFT_235540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_235540
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_235540
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
LOTGIDRAFT_235540
Spliceosome [BR:
lgi03041
]
Complex C
Other components
EJC/TREX
LOTGIDRAFT_235540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
20249879
NCBI-ProteinID:
XP_009063137
JGI:
235540
UniProt:
V3ZYV7
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MAEEMRGALALQQELEKAKFRLKDVNENIKRITGRDPDEPRDRRTVGADGRGRERIFNAA
RRNMGGQDGSPVKRRISVGGAFSRLGPRPARPREDSGDEEDDQKHTVQSSVVAASIETRT
KSMEKQSKDREGMARNRRMFGMILGTLQRFKTEAKDNKDKDDQRRKLEKKLDEKAEKERV
RVRQETRNLLDEMRLEQSKIRRLEQKMELVQDHEAIEKEMVKLSNFLSTKSKPHIFYMPK
KLLSSDDNKLKDSEIFVKKLIDEKQKKMESEIEEMMTRESQREERIRSRIAERARHASGD
MEDHDDEDDDDHEDDQETDQQAIDKHKASMREDKENEVVVKSEPMSDFNVSGIKQEKDAD
GEGEGDDSDVEMGEEEDADGQAIVKDESSKRPKNEEGDKDKGKDGGLHENQDAEMQDGGM
VNTVGGAAKEAQDKDSSKHSRRKSDSKRTDKHRDSREEEGRERHRTKSGQNETSSRSERE
KRRSSDHHEREKRRSRSRDRKDRHKHSRHHKDEKRKRTRHDTDDEDNMDTSTSAKQKRDN
QDERIPQPESESTVQTESTSASLPKDAKPSEKLSKEEFFEAMVSEDLSKSDPSRGSHTDR
ESHADQESQAERESHAERERKIVMAEDGEDNMEDEPADE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaaatgcgtggagctttagctctacaacaagaactcgaaaaagcaaagttt
agactgaaagatgtcaatgaaaatataaagagaataacaggcagggatccggacgaaccg
agagatcgtagaacagtgggtgctgatggtagaggtagggagagaatattcaatgcagcc
agaagaaatatgggcggacaggatggttccccagtcaaaagaagaatttcagttggagga
gcgttttcaagactgggaccaagacctgctagaccacgagaggacagtggcgatgaagaa
gatgaccagaagcacactgtccaatcatctgtagtagctgcctctatcgaaactcgcacc
aaatccatggaaaaacaaagtaaagacagagaaggaatggccagaaataggagaatgttt
ggtatgatattaggtactttacaaagatttaaaactgaagccaaagacaataaggacaag
gatgatcaaagacggaaactagaaaagaaattagatgagaaggcagagaaagaaagagtc
agagttcgtcaagaaacaaggaatttattagatgagatgagattagaacagtccaagata
agaagattagaacagaagatggaacttgtccaggatcatgaagctatagagaaagaaatg
gtgaaactgtctaattttctcagtaccaaatctaaaccacatatattttatatgcctaag
aaacttctgtcttctgatgataacaagctgaaagattctgaaatctttgttaaaaagctg
attgatgaaaaacagaagaaaatggagtcagaaattgaagagatgatgaccagagaaagt
caacgtgaagagcgaatcagatctcgtatagcagagagagctagacatgctagtggtgat
atggaagatcatgatgatgaagatgatgatgaccatgaggatgaccaggagactgaccaa
caggctatagataaacataaagcgtctatgagggaggacaaggaaaatgaggtggtggta
aagagtgaaccaatgtctgattttaatgtttcaggtatcaaacaggaaaaggatgcagac
ggtgaaggggagggggatgacagtgacgtagaaatgggggaggaggaagatgctgacgga
caagctattgtaaaggatgaaagcagcaagcgtcctaagaatgaggagggtgacaaggac
aagggtaaggatgggggtcttcatgaaaatcaagatgctgaaatgcaagacgggggtatg
gtcaatactgtaggtggggcagccaaagaagcacaagacaaggacagcagtaaacattca
agacgtaaatctgattccaaaaggactgataaacatagagactcaagagaagaggagggt
agggaaagacataggactaagtcagggcaaaatgaaactagttcacgctcagaacgcgaa
aaacgcagaagctcagaccaccatgaacgggagaaaagacgctcaagaagtagggatcgt
aaagatagacacaaacactccagacatcataaggatgagaaacgtaaacgcacacgtcat
gatactgatgacgaggacaacatggatacttcaacatctgctaaacaaaaaagagacaat
caagatgaacgcataccacaacccgaatctgaaagcacagttcaaactgaaagcacatca
gcttctttgcctaaagacgctaaaccatcagaaaaactgtccaaggaagaattctttgaa
gccatggtgtctgaagacttatctaaatctgatccatctcggggaagtcacactgatagg
gaaagccatgctgatcaggaaagccaagctgaacgggaaagccacgctgagcgagaaaga
aaaattgtcatggctgaagatggagaagacaatatggaggatgaaccagctgatgaatga
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