Lottia gigantea (owl limpet): LOTGIDRAFT_235806
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Entry
LOTGIDRAFT_235806 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LOTGIDRAFT_235806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_235806
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
LOTGIDRAFT_235806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
20249970
NCBI-ProteinID:
XP_009064003
JGI:
235806
UniProt:
V4B8X8
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MDHLVQATQGKKGFATKRLILFSNFSQPFTDDQVDTIIDGIKNSGTELNVIGPQLNEEDD
DDDTDEPTIDNNFGKEKSPQMRAGEAMIKHILSEVNGDSYSFLEALPALSYFQARQVRQT
AWKVQMEIGTDLKIPVCGYTKIKDFKLKQSWKKVYAKDSESEVGNLRTQHKNDEEETEVD
PEEQVDGYRYGNTLVPMSSDDKENMKYRAVKCLKILGFTKSENIKRHHYLGDGTIAFVAD
KGDEAAAVALSALINALYETDSVMCLLSKALKPNDPLPELSPLIASYFKRPEEVECKIMK
PLEEIKDLFKLEIVAKKKDEKSGDAMFKDKYAAAVALSALINALYETDSVMVARRVYAAN
SAPRLGCLLPVIKTDYECLYWIELPFMEDLRQFTFGSLPVTDDVQTNKKFKPSADQLKVM
DDLITNMDLSKKEGDEDSAEVLKPKLTFNPYFQRTYQCLLSKALKPNDPLPELSPLIASY
FKRPEEVECKIMKPLEEIKDLFKLEIVAKKKDEKSGDAMFKDKEEDGPAAKKVKIDDDFE
GGLENIGRAKITEVGSVTPVEDFKALINYRDEDLFDKACEQMEKTIEKIVMDSFGPQFYG
KASDCLKAYREECIKNSKPDVYNKFIRQFKETLISKAKRDFWDQIVLDKQGLISKLECEG
SKVSKEEADALLADDVKKEGSQKIEEADDADDLLDMM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaccatctcgtacaagccacacagggtaaaaaaggatttgctaccaagaggttgatt
ctgttttcaaatttctctcagccgttcacggatgaccaagtggacactattattgatgga
atcaaaaattcgggcacagaattaaatgtaataggtccacagttaaacgaagaagatgac
gatgacgatactgatgaacctacgatagataataactttgggaaggagaaatcaccccag
atgagagcaggggaggccatgattaaacatatactcagtgaggttaatggagacagctac
agttttttggaagcactaccagctctgagttactttcaagccagacaagttcgacaaact
gcctggaaggttcaaatggaaataggtacagacttgaagataccagtgtgcggttacacc
aagattaaagattttaagttgaaacagtcgtggaagaaagtgtatgctaaagatagtgag
agtgaggttggcaatttacgcacacaacataaaaacgatgaagaagaaacagaagttgat
cccgaagagcaagttgatggatatcgctatggtaacaccctggttccaatgtcatcagat
gataaagaaaatatgaaatacagagctgttaaatgtctgaagattctaggcttcactaaa
tcagaaaatattaaaagacatcattatttaggagatggtactatagcttttgttgctgat
aaaggtgatgaggctgcagctgtagctctatcagctctgataaatgctctatatgaaaca
gactcagttatgtgcttgctgagcaaggccttgaaaccaaatgaccccttaccggagtta
tctcccttgatagcctcgtattttaaacgtccagaagaagttgagtgtaaaattatgaag
ccattagaagaaatcaaagatctattcaaactggaaatcgtggccaagaaaaaggatgaa
aaatcgggagatgcaatgtttaaagacaagtatgctgcagctgtagctctatcagctctg
ataaatgctctatatgaaacagactcagttatggttgctagaagagtctatgctgctaat
tctgcaccgagattgggttgtttacttccagttattaaaacagattatgagtgcttatat
tggattgagctcccctttatggaagatctgcgacagtttacgtttggctctctaccagtc
acagatgatgtacaaaccaataaaaaattcaaaccttcagctgatcagttaaaagttatg
gatgatttaatcaccaatatggatctctccaagaaagagggagatgaagacagtgcagaa
gttttaaaaccaaagttaacctttaacccttattttcaacgaacataccagtgcttgctg
agcaaggccttgaaaccaaatgaccccttaccggagttatctcccttgatagcctcgtat
tttaaacgtccagaagaagttgagtgtaaaattatgaagccattagaagaaatcaaagat
ctattcaaactggaaatcgtggccaagaaaaaggatgaaaaatcgggagatgcaatgttt
aaagacaaagaagaagatggtccagcagctaagaaagttaaaattgatgatgatttcgaa
ggtggtttagaaaatattggcagagcaaagattacagaggtgggatcagtgacccctgta
gaagattttaaagcgttgattaactatagagatgaagacttgtttgataaagcgtgtgaa
caaatggagaagacaatagaaaagatagtgatggactcgtttggtcctcagttttatggt
aaagctagtgattgtctgaaagcttaccgagaagagtgtattaaaaattcgaaaccagat
gtttataataaatttattcgacaatttaaagaaacgttgattagtaaagctaaacgtgat
ttctgggaccaaattgttttagacaaacaggggttaatctccaaactggagtgtgaaggc
agtaaagtaagtaaggaagaagctgatgctttactagctgatgatgtgaagaaggaggga
tcccagaagatagaagaagctgatgatgctgatgatttgctggatatgatgtga
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