Lottia gigantea (owl limpet): LOTGIDRAFT_236170
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Entry
LOTGIDRAFT_236170 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03013
Nucleocytoplasmic transport
lgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOTGIDRAFT_236170
09122 Translation
03013 Nucleocytoplasmic transport
LOTGIDRAFT_236170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_236170
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_236170
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
LOTGIDRAFT_236170
Spliceosome [BR:
lgi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
LOTGIDRAFT_236170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
TPH
DUF4961
Motif
Other DBs
NCBI-GeneID:
20250068
NCBI-ProteinID:
XP_009064650
JGI:
236170
UniProt:
V4B7Q0
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MTSVARDEKERKKKRLIKTETSTPEVKKSKETVALFYAEEAEVDKRDPETDLTLFQGACG
VVREAVNDIQKMKTHGKTNKSELEEKRADAVIQFVTLKKINRLSHFRCRKVRDSTNEAKQ
RIDKYHLQLQNLLYEAMHLQKEINKCLEFKSKDEEIDLVPVEEFYKEAPKQISKPETTKK
DEHQLTLARLDWELEQRQRLSKKLKEVSSSKDEILKEIDTKQEYLDSLQPKLNSILQATK
PVQTYLKMPYDETKEQHSTALHLPHPLYVLYMQSSAYKDACDKNLKVTIDGDIHSAKTLD
MSVQEIEEDSDSDNEEHEKKTIAEEKLYEHWKQNNPDLRKVESELQQEDVINKWSDQIVE
QEEKLLSARLEEKEFERLQEEKRQAALEEERKKEMKRLQDQKKLKQVLEDQMRELRQRES
ESERIKNEQESLELEQWNLEKLEESRRLKEEQRKKQDFGLKKIAFVTKKKETTEDRLSDK
KQRVFRKHPLTVAMEILCKEGSELLLTFSYNLQLHITALFIIIITEGSKLLLTFSYLLQL
EIITVHVKVLPSLESVHSSISGSDLLSPDSILNEIYTGDHGNNTPNPANQYELRRMGLHD
FSEYVNQVGRPYQWTQWLGGLQFLGDGNPVTVKSTVSSGYMQQTVKQLRKRLKARLALLH
QMASLERNTIPVSSNLIDMFPAKISSRLISWKRSTYEDFCSLDYTRNIIEGSLVSETDIY
FVATMERGSAKLISQVVVAADYPTVPPMFVVSISWQTDRNATTDVHIQELEEEVNVHYTE
LIKDKSKDNLLSNQLQRLLMCFDIYLETETQDLSAPIEIPKEKVFTRLARGPNRKKPYKY
IPDLGIFTHR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgtcgcaagggatgaaaaagaaaggaagaaaaagcgactgattaaaacagaa
acctcaaccccagaggttaaaaaatctaaagaaactgttgctttgttttatgctgaagaa
gcagaagttgataaaagagacccggaaacagatttaactttgtttcaaggtgcttgtggt
gttgtgagagaagctgtcaatgatatacaaaaaatgaaaactcatggaaaaactaataaa
agtgaactagaagaaaaaagagctgatgctgtaatacagtttgttacattaaagaagata
aatagattgtctcattttagatgccgtaaagttagagattccactaatgaggccaaacag
agaatagacaagtaccatcttcagttacagaatttgttatatgaagctatgcatttacag
aaagaaattaataaatgtttggaattcaaatctaaagatgaagaaatagatttagtacct
gtagaagagttttataaggaagctccaaaacaaatatcaaaaccagaaacaactaagaaa
gatgaacatcagttgacactcgctagattagattgggagttagaacaaagacaaagatta
tcaaaaaaactgaaagaagtatctagtagtaaagatgaaatattaaaagagattgatact
aaacaagaatatttagacagtctacaacctaagttaaactctattttacaagcaaccaag
ccagtgcagacatacctaaaaatgccatatgatgaaactaaagaacaacattctacagca
ttacatttaccacacccattgtatgttttatacatgcagtcttcagcttataaagatgct
tgtgataagaatttgaaagtaacaatagatggagatatacattcagctaaaactctagat
atgtcagtacaagaaatagaagaagatagtgacagtgataatgaagaacatgaaaagaaa
acaatagctgaagaaaaattatatgaacattggaaacaaaataatccagatttaagaaaa
gtggaatctgaactacaacaagaagatgttatcaataaatggtcagatcagatagttgaa
caagaggagaaattattatcagcacgactagaggaaaaggaatttgaaagactacaagaa
gaaaaaagacaagcagctttagaagaagagagaaaaaaagaaatgaaaagactacaagat
cagaagaaattaaaacaagttttagaggatcaaatgagagagctaagacagagagaatct
gagagtgaaagaattaaaaatgaacaagaaagtttagaattagaacagtggaatttagaa
aagctggaagaaagtagaagattgaaggaagaacagaggaaaaaacaagattttggacta
aagaaaattgcttttgtaacaaagaagaaggaaacaacagaagatagattatctgataaa
aaacagagagtttttcgtaaacatcctcttacagttgccatggagatattatgtaaagaa
ggaagtgaattattactgactttctcctacaatttacaactacacataacagcacttttt
attattattattacagaaggaagtaaattattactgactttctcctaccttttacaacta
gagattataacagttcatgtgaaagtattacctagtctagaaagtgtacacagctctatt
tctggatcagatttgttatcaccagattctatattgaatgagatctatactggtgatcat
ggtaacaatacgccgaatcctgccaatcaatatgaattacgtagaatgggattacatgat
tttagtgagtatgtaaaccaagtaggcagaccatatcaatggacacaatggttaggtggt
ttacagtttctaggagatggtaatccagtcactgttaaaagtactgtcagctctggctac
atgcaacaaactgtcaaacaactacgaaagagactcaaggcacgactggcgttacttcat
caaatggcttcactcgagagaaatactataccagttagtagtaatctgattgatatgttc
ccagctaaaatatccagtcgcttaatatcatggaaacggtcaacatatgaagatttctgt
agtctggattataccaggaatataattgaaggaagtttagtatcagaaactgatatctat
tttgttgctactatggaaagagggtctgccaagttaataagtcaggttgttgtagcagct
gattatcctacagtaccaccaatgtttgttgttagtatttcatggcaaacagacagaaat
gctaccactgatgtccacatacaggaattggaagaagaagtaaatgttcattatacagaa
ttaattaaagataaaagtaaagataatttattatccaatcaattacaaagattattgatg
tgttttgatatctatcttgaaactgaaactcaagatttatcagctcctattgaaatacct
aaagagaaagtgttcaccagattagccaggggaccaaataggaagaaaccatacaaatat
attccagatttaggtatctttactcatcgataa
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integrated database retrieval system