Lottia gigantea (owl limpet): LOTGIDRAFT_236208
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Entry
LOTGIDRAFT_236208 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LOTGIDRAFT_236208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_236208
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LOTGIDRAFT_236208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_IFT140_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_ELP1_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
20250078
NCBI-ProteinID:
XP_009064736
JGI:
236208
UniProt:
V3Z1V7
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MATTEAHVEIDLIEDDIEIVEEKPKVCLRAGQSIVAVKPVFSHDGKCLFCVSGTTVKVFS
TTGGGCIRELKGHTQTITDVCLNPRNRLQILTCSVDGWIKQWDYTDGVILRKFNVNTPLY
GILCYKETSKLTVAVIQEKKPKSKGYELVRYVLSDWLNDSKPKPSTLLDHCSANRKSLHI
GAQDKYLASIREKSLVVVDLKNGDKRTVSKDENCYTCITCHPVQPCIVIGDELGRIHFWW
NFFKKNPVETSYHWHSLPVKCLEFTQEGSNLLSGGHECVLVKWQFDSSNRDFLPRLGSPI
NHITCSPDNTVYALSQDDNAIRLISNTYSPVCFYQGLTRGHMSQVKPRSSTGLLFDPLSK
ALVTNGRVGHLQFYNVHTDIQLFNLDITCQNYISPDSLSKDSMATQVTKATFNHCGKWLA
TAEYWSAENLSPEIRIKFWIFNEEKQTYILNTSVEFPHEEEIHWLKFRPWCRGNKDLLMV
VSTCQDGSFKLWSAEDSTDLYGTVTKWMCESSSTYRDLPAGQAEFTEDGSILGVVFKSTV
TLWNPDTNELKATLHSNLGDFNINNISFGCNKCCQYLVTTSDEHITSWNLLSLSVQWTVN
VRVSTLIADPFSTVMAAFTTDRHLFVFEPSKPQPVYKHSTVSLSAITGAVFIPHNKSEQH
NKTSALSWQTQCQLYFMNMDQKLSTVDYEDHEDDRYSTLSVKSNIPKTPFGELIAEKSTR
DKQPETNIDLLRRKDSSFVNEILITSPHVQPPVTVLCSKFLQSLLISEKKSSQEKEEEEE
EDYKETHDSDSDSEMDIKDNNISNQMEIDILNIEHLDIDISKNKKKERAKIEAVCAEEFT
WFKVKK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccgaagcgcacgtggagatagatttgatagaggatgacattgaaattgtg
gaagaaaagccaaaagtttgtcttcgtgcaggtcaaagtatagttgcagtcaagcccgta
ttctcccatgatggaaaatgtctattctgtgtatctggaacaacagttaaagtgtttagt
acaactggtgggggatgtatacgagaactaaaggggcacacacagactataactgatgtt
tgtttaaaccccaggaatagactccagattttaacatgttctgtagatggttggatcaaa
cagtgggattatacagatggggttatactgcggaaatttaatgtgaatactccgctgtat
ggtattttatgttataaagaaacctccaaactgaccgttgctgtcattcaggaaaagaaa
ccaaaatctaaaggttatgagttagtaagatatgtgttatctgattggttaaatgacagt
aaacccaaaccatctacactgttagatcattgtagtgcaaatagaaaaagtcttcatatt
ggtgcacaggataaatatttagcatcaatacgagaaaaatcactggttgtcgttgatttg
aaaaacggggataaacgaactgtcagtaaagatgaaaactgttatacgtgtatcacgtgt
catccagtacagccttgtattgtcattggtgatgaactcggtaggatacatttctggtgg
aatttcttcaagaaaaatcctgttgagacaagttaccactggcactctttgcctgttaaa
tgtctggaatttacacaggaaggttctaatctactatctggtggtcatgagtgtgttttg
gtaaaatggcagtttgattcgagtaaccgagattttctacccagattgggatctcctatc
aatcatataacttgttctcctgataatacagtttacgccctctcacaggatgataatgct
atccgactgatatccaacacctacagtccagtgtgtttttaccaggggttaacaaggggt
catatgtcacaggtcaaacccagatcttcaactggactactgtttgaccccctgtctaaa
gcactggtcactaatggacgtgttggtcatctacagttttataatgtacatacagatatt
caactattcaatttagacataacttgtcaaaactacatctcacctgattctttatctaaa
gactccatggcaacccaggtaaccaaggcaaccttcaatcattgtggtaaatggttagca
acagctgaatactggtccgcagaaaatctcagcccggaaataagaataaaattttggatc
ttcaatgaagaaaaacaaacctatatattgaatacgagtgttgaatttcctcacgaagaa
gaaatacactggttaaaattccgtccttggtgtcgtggaaacaaagatttattaatggtt
gtctctacatgtcaagatggcagctttaaactgtggtctgcggaggacagcacagattta
tatggtaccgttacaaaatggatgtgtgaatcttcgagcacgtatcgtgatctaccagca
ggtcaagcagaatttacagaagatgggtctatattaggcgtggtatttaaatctactgtt
acactgtggaaccctgatactaatgaactgaaagcaacgttacacagtaatctaggagac
ttcaacattaataatataagttttgggtgtaataaatgttgccagtatttagttaccaca
tcagatgaacatattacgtcctggaacctcctgtctttatcagtacaatggacagtcaat
gtacgagtgtctactctgatagcagatccattttcaactgtcatggcagcttttacaaca
gacagacacttattcgtatttgaaccatctaagccacaacctgtttataaacattctact
gtcagtctgtcagccattacaggagctgtatttatacctcacaacaagtctgaacaacac
aataaaacaagtgctctatcttggcagacgcaatgtcagctgtactttatgaatatggat
cagaaattatccacagtagattacgaagatcatgaagatgacagatattctactttatca
gtaaaatccaacatacccaaaacaccatttggtgaattgatagctgaaaaatctaccaga
gacaaacaaccagaaactaacattgatcttctacgacgaaaagatagcagttttgttaat
gagattttaataacctctccccatgtccaaccaccagtcactgtcctgtgttccaagttt
ctacaatctttgttaatttctgagaaaaaatcatcacaagaaaaagaagaagaagaggaa
gaagattacaaggaaactcatgattctgattcagattcagagatggacattaaagacaac
aatatatctaatcaaatggaaatagacattctaaatatagaacatttagatattgatata
tcaaagaacaaaaaaaaagagagagcgaaaattgaggctgtttgcgcggaagagttcaca
tggtttaaagttaaaaaatga
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