Lottia gigantea (owl limpet): LOTGIDRAFT_236479
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Entry
LOTGIDRAFT_236479 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03013
Nucleocytoplasmic transport
lgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LOTGIDRAFT_236479
03015 mRNA surveillance pathway
LOTGIDRAFT_236479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_236479
Enzymes [BR:
lgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOTGIDRAFT_236479
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
LOTGIDRAFT_236479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
20250165
NCBI-ProteinID:
XP_009065654
JGI:
236479
UniProt:
V4B581
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSDDWGALCDAQEASLTKTVGGLNIGQSGQPNSVASPPKPASAVTNGSGDTAQPPASGDA
TEEKQVSKEEESLLRKILRSKLVTTKADLEVLRKDPNSPLFSVKSFEALNLKSELLKGLY
DMGFNAPSKIQETALPSLLADPPVNMIAQSQSGTGKTAAFVLTMLSRVDTSKHYPQCLCL
APTYELALQIGQVTELMAKHMTDLKIKYAVKGNRIERGQKISEQIIIGTPGTLMDWALRY
KFFDLRKIKVFVLDEADVMIATQGHQDQSIRIQKGLADACQMLLFSATYDADVMKFAQDV
IPHDPITIKLRREEESLDNIRQYYIECDNIEDKYNAISNIYGTISIGQSMVFCHTRKNAS
WLAERMSKDGHVVGILTGDLAVEQRAAIIKRYREGMEKVLITTNVSARGIDVEMVTVVVN
FDLPILPDGKPDCETYLHRIGRTGRFGKSGIAINFVDGQRSMNNLKYIEKHFGRKIIKLD
AEDMDSIEKIGT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgattggggagcattgtgtgatgctcaggaagcttctttaacaaaaacggtc
ggtggattgaatattggacaaagtggtcaaccgaatagtgtggccagtcccccaaaacca
gcctcagcagttacgaatggaagtggggacacagcccaaccccctgcctcgggtgatgct
acagaggaaaaacaagtatcgaaggaggaggaatcattgctacgtaaaatccttagatct
aaattggtgacaacgaaagctgatttagaagttctacgtaaagatcctaattcgccattg
ttttccgttaaaagttttgaagctctcaatttgaaaagtgaattattaaaaggtttatat
gatatgggatttaatgctccatcaaagattcaagaaacagcgttaccgtcccttctggca
gatcccccagtaaatatgatagcacagagtcaaagtggaacaggtaaaacggcagctttt
gttttaacgatgttaagtcgagtggataccagtaaacattatccacagtgtctctgtctt
gccccaacctatgaactagcgttacagatcggtcaagttacagaactgatggccaaacat
atgactgacttgaaaattaaatatgctgtaaaaggcaacagaatcgagagaggtcaaaaa
ataagtgaacagattataattggtacgccaggaactctgatggattgggctttacgctat
aaattttttgatttacgaaagataaaagtgtttgtattagatgaagcagatgttatgatt
gctacacagggacatcaagaccagtccattcgcatacagaaaggtttagcagacgcctgt
caaatgttgttattttcggcgacgtatgatgcagacgtgatgaagtttgcccaagatgtg
atacctcacgatcctataactataaaactacgacgagaggaagagagtttagataatatt
cgccagtattatattgagtgtgacaacatagaagacaaatataacgctatatctaacatc
tatggtacaatatctatagggcagtccatggtattttgtcatacaagaaagaatgctagt
tggctggctgagagaatgtctaaggatggtcatgtagttggaatattaacaggagatttg
gctgtggaacagcgagcagccattatcaaacgatatagagagggaatggaaaaagttttg
ataactactaatgtttcagctagaggtattgacgtagaaatggtaacagtcgtggtgaac
tttgacctgccaatattacccgacggtaaacccgactgtgagacatacctgcatagaata
ggacgaactggtcgatttggtaaatctggtatcgccattaattttgtggacggtcaaagg
tcaatgaacaacttgaaatatatcgagaaacattttgggaggaagataataaaacttgat
gcagaagacatggattctattgaaaaaattggaacataa
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