KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_236786
Entry
LOTGIDRAFT_236786 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K12587  exosome complex component MTR3
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LOTGIDRAFT_236786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_236786
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LOTGIDRAFT_236786
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 20250253
NCBI-ProteinID: XP_009066142
JGI: 236786
UniProt: V3ZGB1
LinkDB
Position
Unknown
AA seq 267 aa
MPVDSKRICGPEITKNPYNFLINGNEKGELIINGKRRDGRKPDQARPLFLRPGLISQAKG
SAYIEQNHTKVICAVYGPREVIRKEDFSMKGQITCEFKFATFSCKKKRGHQQDSEEKDYS
VQLLEALEPAVQLDKFPKSQVNLYLTVLQNDGSALAASITCASLALAHAGIEMFDLVVGS
SVRIHGNEILVDPCEEEEFHSNTNIGVDEGGVVLGLMPSINQISALTSKGELNFDTTSQA
VKTCIQNCQKVYPVLQNCLVNSLKEKD
NT seq 804 nt   +upstreamnt  +downstreamnt
atgccggttgattcgaaaaggatttgtggaccagaaatcactaaaaacccgtacaatttc
ttgataaatggcaatgaaaaaggcgaattgatcatcaatggtaaacgaagggatggacga
aagccagatcaggcaaggcctctttttttacgtccagggttaataagccaagctaaagga
tcagcttatattgaacagaatcatacgaaagttatttgtgctgtttatgggcctcgtgaa
gtgatcaggaaagaagattttagtatgaaagggcagatcacttgtgaatttaaatttgcc
acattttcgtgtaaaaagaagcgtggtcaccaacaagacagtgaggaaaaggattactct
gttcaacttctggaagcattggaaccagcagtacagcttgataaattccccaaatctcaa
gtcaatttatatttaacagttttacaaaatgatggcagtgccctggcagcgtctataacc
tgtgcctccttagctttagctcacgctggtatcgaaatgtttgacttagtagtgggttcc
tctgtgcgtatccatggtaacgaaattttagttgacccttgtgaagaggaggaatttcac
tcaaatactaatataggagttgatgaagggggcgtggttttaggcctcatgccatccatc
aatcaaatatcagccttgacctcgaaaggagaattaaactttgatacgacctctcaggct
gttaaaacctgtatacagaattgtcagaaagtttatccagtcctgcagaattgtttggtg
aattcgttaaaagaaaaagactaa

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