Lottia gigantea (owl limpet): LOTGIDRAFT_237682
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Entry
LOTGIDRAFT_237682 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LOTGIDRAFT_237682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_237682
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_237682
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
LOTGIDRAFT_237682
Coactivators
SAGA/TFTC/STAGA complex
LOTGIDRAFT_237682
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
LOTGIDRAFT_237682
STAGA complex
LOTGIDRAFT_237682
TFTC complex
LOTGIDRAFT_237682
SAGA complex
LOTGIDRAFT_237682
SLIK complex
LOTGIDRAFT_237682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
TFIID_NTD2
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_like
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
WDR54
Mala_s_1-like
Beta-prop_WDR35_TULP_N
Nbas_N
HTH_12
Motif
Other DBs
NCBI-GeneID:
20250525
NCBI-ProteinID:
XP_009045899
JGI:
237682
UniProt:
V4B750
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MCDVERQISREEFYKMRRLKREEIMTSVNHYLRRRKFDKSETQATSEEKVNRSKRLCCRE
KSLTELSVISQMNSSSLTENILSFSSISGDVTACDQQFTKLKNFILEGLEAYKIELKSLL
YPIFVHVYLEMLCNGHKMPAHKFYDRHSSLFKDDDLHKPVMRILRKLDMKTDVLSCKDIT
EFLDNRYHVNLSEDTLAYLLRYLKNEDNMIMFQIFNQFLKVVVPTCASTVELREGSKNEL
RETDSKDIKDECNNDNQTVLKQAISKIRDGPPSISSICCYTFLNTSNGLYSVDVSSNNSL
ISAGFEDSTISLWSLDPDLIHTNPFLSNPAVITLAVDHCTGSDDSNNLSQRKKDVETIKL
RGHNGAVYKTCFTPDSQYLLSASLDNSVRLWDLSSHSNVVLYRGHSSAVWSLDTSGLGYF
VSCSQDRTAKLWSYDRNYPIRSFIGHTYDVDVVKFHPNSNYVATGSGDRTIRLWSLQDGR
CVRLLQGHHSSILSLAFSPNGQYLASAGEDRRIKIWDLSSGTLFKELQGHSDTVYSLNFN
PDSTILASGGLDCCVRLWDVRKNREVKSELKPSGISDNQSSPELHGIFSTKSTSILFLRF
SKNNVLRVAGNIL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgatgttgaacgacagatttcccgagaagagttttacaaaatgagaagactgaag
cgagaggaaattatgacgtctgtaaaccattatttgaggcgtaggaagttcgacaagtca
gagacacaagctacatcagaagagaaagtaaacagaagtaaacgactatgttgtagagag
aaaagtttaacagaattgagtgttattagtcagatgaactcgagtagtttaacagagaat
attttatcatttagtagtatatcaggggacgttacagcctgtgatcaacaatttaccaag
ttaaagaattttattctggaaggattagaagcatataaaatagaactcaaatcactgctg
tacccaatctttgttcatgtatatttagaaatgttgtgtaatggccacaagatgccagct
cacaagttttatgatcgtcattcctcgttatttaaagatgacgaccttcataaaccagtg
atgagaatactacgtaagctagacatgaagactgatgtgttatcttgtaaagacattaca
gagttcctcgataatagataccatgttaatctatcagaagatacactggcttatttactc
agatatcttaagaatgaagacaatatgataatgttccagatctttaaccagtttctaaaa
gttgttgtgccaacttgtgccagtactgtagaattgagagaaggaagtaagaatgaatta
agagagacagatagtaaagatataaaggatgaatgtaataatgataatcaaacagtacta
aaacaagctatcagtaaaatacgagatggaccccctagtatatcttctatatgctgttat
acttttcttaatacatcaaatggactatacagtgtggatgtatcgagtaataatagtttg
atatcagctggttttgaagactctaccatatccttgtggagtttagatcccgatttaatc
cataccaatccattcctatctaatcctgctgttataactctagctgttgatcattgtact
ggtagtgatgatagtaataacttgtcacagagaaaaaaagatgttgaaactatcaaacta
cgaggtcataatggtgctgtttataaaacctgttttacccctgattctcaatatttactc
tcagcttccctggataactctgtgaggttatgggatctctccagtcacagtaatgtggtg
ttgtacagaggtcatagttcagctgtttggtctctggatacaagtggcttgggatatttc
gtcagttgttctcaagatagaacagccaaactgtggtcatatgacagaaattatccaatc
agatcctttattgggcatacttatgatgtggatgtggtgaaattccatcccaacagtaac
tacgtagcaacgggttctggggatagaactatcagattgtggagtttacaagatggccgc
tgtgtccgtctgctccagggtcatcacagttcaatattgtctttggccttttcaccaaac
ggtcaatatctagcttctgctggagaagaccggcgtataaagatatgggatttgagctct
ggtacattgtttaaagaactacaaggacacagtgatacagtctacagtctaaacttcaat
ccagacagtactatattagcatcaggaggtctggactgctgtgttcgactctgggatgtt
aggaagaacagagaggtcaagtcagagttgaaacctagtggcatcagtgataatcaatct
tctccagaacttcatggaattttctcaactaagtctacttccattttgttcctgcgattc
tctaaaaataatgttttacgagtagcagggaatattttatga
DBGET
integrated database retrieval system