KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_237809
Entry
LOTGIDRAFT_237809 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K14323  protein CASC3
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03013  Nucleocytoplasmic transport
lgi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    LOTGIDRAFT_237809
   03015 mRNA surveillance pathway
    LOTGIDRAFT_237809
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_237809
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     LOTGIDRAFT_237809
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 20250560
NCBI-ProteinID: XP_009046121
JGI: 237809
UniProt: V4AZM9
LinkDB
Position
Unknown
AA seq 1000 aa
MADRRRRRGSLENENNDSNPVVRKSECSKMEIIFIVNFWKFSEYSMESEHGDEEQAELSE
YESADEEKQGKEEETESEEETETETESEEEDDDDDDGQEIDVVIEDDEWVDEERQSGDGE
EQPDSRDVDDDEDRKNPAFVPRKGAFYEHDLRLGDAKPPKEEDGERPKKKLWKDDGKWLH
DGYNEALQGPKSTEELVDIYGYDVRAGSHPPEYRPRPRRGGTGRGRRQNHKLGDFVPSER
SGGNSDRDYQRSKSEETEYIPMEYRSPQSYRATDTNDSRPSKSQSYNNNRHRDRTYNDNN
QDNRYKGDNYQSDYSNKRDNSFSHRNKGDNSYRKSDNYIDYRNKGDNQGEYENRDNTSNY
RKKDNNYQSDHKNRGNDYQSNYRNKGDNYQSNYDKSQDFRNAPNNQGQYNNYNDQGDYHD
NYRGRGRRGRGVGRGRGQRRHDQEENNSGSVNVPRQFTNSSYKSPENGDQTHFEANDGAD
INISNKENVQTISVTITNKTTEKAYESETRRMKYVGGKPYIQEEIRNAVEKENMAVISPP
ITSNSSAEMEKSGQVVNKAGKIHQSTGGSIKADNSLQGRPKRYSSQRQRTVPDNTYNKQQ
VADSSAYYNQASAYPNNQYYPGDSQSTTSGPDSPAGYQHQQQPILPVQPSIPYPHPVSSA
PRMYSPAPPAIATPVITPNVSLPTPHPTMIPPPNYLGQGPVIYGAAPPGINPPPAFPVPL
GYTGPNPPQQIQSPPSQQPEVYRGGTIYYPPELQQTNPHRSPVRRTKSAIPIVKPQEKKD
GAGTQSEVEYIRDDEQSVSDDVPLPVEDTEVFKKELSEISSALISLEGELRAGSTKVRQK
EEDLKNLDLQKKLDSYLQSEESTVNVPKEHLKSGASQTIEDINLNSQTEGESFNVAQKGD
ALDLGSIKTEIDAIKTESVQSVSGSNTDQTEKNTLKDLPSEISDAKHIVNDNSPSDTTVK
ESVGNVSSPLASEYGGLVDTKSDIETKTETSTDKSSPIDN
NT seq 3003 nt   +upstreamnt  +downstreamnt
atggcggaccgacgaagacggcgaggttcgcttgaaaatgagaataatgattcaaaccct
gttgttagaaaatccgaatgttctaaaatggagattatttttatagttaatttctggaag
tttagtgaatacagtatggaaagtgaacatggagatgaagaacaggctgaattatcagag
tatgaaagtgcagatgaagaaaaacaaggcaaggaagaggaaacagaaagtgaagaagaa
acagagactgaaactgaatctgaagaagaagatgatgatgatgatgatggccaagaaata
gatgttgttattgaagatgatgagtgggttgatgaagaaagacaaagtggagatggcgag
gaacaaccagattctcgagatgttgatgatgatgaagacagaaaaaacccagcttttgta
cccagaaagggtgctttttatgagcatgatttacgattaggtgatgcgaagccaccaaaa
gaagaagatggagaaagacctaaaaagaagttatggaaagatgatggtaaatggttacat
gatggttacaatgaagctcttcaaggtccgaaatcaactgaagaacttgtagatatatat
ggttatgatgttagagctggtagtcatccaccagaatatagaccccggcctcgtagagga
ggtacggggagaggaagaaggcaaaaccataagctcggtgattttgtaccatctgagcgg
tctggtggaaattcagacagagattatcagagatctaaatcagaggagactgagtacata
cccatggaatacaggagtcctcaatcttacagggcgactgacacaaatgactccagaccc
tcgaaatctcagtcatataataataatcgccacagagacagaacttataatgataataat
caggataacagatacaaaggagataactatcaatctgattattccaataagagagacaac
tctttttcccacagaaacaagggtgacaattcctatcgtaaaagtgataattatattgat
tatagaaacaaaggagataatcaaggtgaatatgaaaatagagacaatacttcaaattac
cgtaagaaagataataattaccagtctgatcataaaaacaggggaaatgattaccagtct
aactataggaataagggagacaattatcaatctaattatgataaatctcaagatttccga
aatgccccgaataatcaaggccagtataacaattataacgatcaaggtgattatcatgac
aactatagaggtcgtggaaggagaggtcgtggtgttggacgaggacgaggtcaaagaaga
catgatcaggaagagaacaattctggatctgttaatgtgccaaggcagttcactaactct
agttacaagtctcctgaaaatggtgaccagactcattttgaagctaatgatggagcagat
atcaacatctcaaataaagagaatgttcagaccatcagtgtgacaatcaccaataaaaca
acagagaaagcatatgaaagtgaaactagaaggatgaaatatgttggcggtaaaccatat
atacaggaagagattaggaatgctgttgagaaagaaaatatggcagtcattagtcctcca
attacatcaaactcttcggctgaaatggagaaatctggtcaagttgtcaacaaagctggt
aaaattcatcaatctacaggaggtagtattaaagcagacaatagtttacagggtcgacct
aaacgatattcctcacaacgtcaacgtacagtccctgataatacttataataaacaacaa
gttgctgactcttctgcatattataatcaagcatcagcatatcccaacaatcaatattat
cctggtgactcacaatcaacaacatcaggtcctgactcacctgcaggttatcaacatcaa
caacaaccaatattaccagtacaaccatctataccttatcctcatccagtgtcctcagca
ccgagaatgtattcacctgccccaccagcgatcgctacaccagtaataacacctaatgtc
tccttaccaacccctcatcctacgatgattcctccaccaaactacctgggacaggggcca
gttatatatggtgctgcacccccggggatcaacccaccacctgcttttcctgttcctcta
ggctacactggacctaatcctcctcagcaaattcagtcacctccatcacaacaaccagag
gtatacaggggaggaaccatttattatccaccagagcttcaacagaccaacccacatcgg
tctccagttagacgtactaaatcagctatacctatagtcaagccacaggagaaaaaggat
ggagctggtacacaaagtgaagtagagtatataagagatgatgaacaatctgtatctgat
gatgttccgttaccagtagaagacacagaagtctttaaaaaagagctcagtgagatttca
tctgctcttatcagtctagagggcgaacttcgtgctggaagtactaaggtacggcaaaaa
gaggaagacctgaaaaatttagacttgcagaaaaagttagattcctatctgcaaagtgag
gaatcaacagtgaatgtacctaaagaacatcttaaatctggtgcatcccaaaccatagaa
gatataaacctgaattcccaaacagagggtgaatcattcaatgtagcgcaaaaaggtgat
gctttagatttaggctccattaagactgaaatagatgcaattaaaactgaaagtgttcaa
agtgttagtgggtcaaatacagaccagacagagaaaaatacattaaaagacttgccaagt
gaaattagtgatgctaagcatattgtgaatgataactccccaagtgacaccactgtgaaa
gaaagtgtagggaatgtaagcagccctctggctagtgaatatggtggtttagtagatacc
aagtcagacattgaaactaaaacagaaacttcaacagataaaagttcacctattgataat
taa

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