Lottia gigantea (owl limpet): LOTGIDRAFT_238545
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Entry
LOTGIDRAFT_238545 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04120
Ubiquitin mediated proteolysis
lgi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LOTGIDRAFT_238545
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
LOTGIDRAFT_238545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgi04121
]
LOTGIDRAFT_238545
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_238545
Ubiquitin system [BR:
lgi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
LOTGIDRAFT_238545
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
LOTGIDRAFT_238545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF12
F-box
Beta-prop_IP5PC_F
WD40_like
Beta-prop_IFT140_1st
KNTC1_N
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_Nup120_160
F-box_5
WD40_2
F-box_4
Motif
Other DBs
NCBI-GeneID:
20250784
NCBI-ProteinID:
XP_009048884
JGI:
238545
UniProt:
V4AZA1
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MQQRDMCMKYFEHWTENEQTEFVEHLLSHMCHYQHGRINAYLRPMLQRDFISALPAKGLD
HIAENILAYLDSVSLCSAELVCKEWYRVVSEGNLWKKLIERKVRTDSLWKGLAERRGWGN
TLFKPKPGEPAKDHKFYRGLYPSIIEDIDRIEDNWRTGRHTLQRIHCRSETSKGVYCLQY
DDEKIISGLRDNTIKVWLWDRSQLECVKVLTGHTGSVLCLQYDEKIIISGSSDSTVRVWG
VKTGEMLNTLIHHCEAVLHLRFCDGIMVTCSKDRSIAVWDMQSPTEINLRRVLVGHRAAV
NVVDFDNRYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYHDRLVVSGSSDNTIR
LWDIEYGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRSPAGTLCLR
TLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNVPIPEGTRSPSRTYTYVTQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagagagatatgtgcatgaaatattttgaacattggactgaaaatgaacaaact
gaatttgtagaacatctcttgtctcatatgtgtcactatcaacatggtagaataaatgct
tatttgcgtcctatgttacagagggattttatctctgcacttccagcaaagggcttggat
catattgctgaaaacattctagcctatttagattcagtatcactctgctcagctgaatta
gtttgtaaagagtggtatagagtagtttctgaaggcaatttatggaaaaaattaatagaa
agaaaagtgcgaacagactctttatggaaaggtttagctgaaagacgtggatggggcaat
acattatttaaaccaaagcctggagaacctgccaaagatcataagttttatagaggatta
tatccttctattatcgaggatattgatagaattgaagataattggaggactggtagacat
acattacagagaatacattgtcgtagtgaaaccagtaaaggagtttattgtttacaatat
gatgatgaaaaaattatcagtggtttacgtgataacactatcaaagtttggttatgggac
agatctcaattagaatgtgtaaaagtgctaactggtcatacaggatctgtattatgttta
caatatgacgagaaaataattatatcaggttccagtgattctactgtccgagtatggggt
gtaaagacaggagaaatgttaaacacattaatacaccattgtgaagcagtcttacattta
cgattctgtgatggcattatggtcacttgttctaaagatagatctattgctgtatgggat
atgcagtcaccaacagagattaatttacgcagggttttagtgggtcatcgtgctgctgtt
aatgttgtagattttgataacagatatattgtatcagcttctggtgacagaactataaag
gtttggaatacatctacatgtgaatttgtgcgaacattaaatggccataaaaggggtatt
gcttgtttacagtatcatgatagattagttgttagtggtagttctgataatactatcagg
ttatgggatatcgaatatggtgcttgtttaagagttttagaaggccatgaagagttagtt
agatgtattagatttgacaataaaaggattgttagtggtgcttatgatggcaaaataaag
gtatgggacttacaggcagccttagatcctcgttctccagctggtaccctctgtctccga
acattagtggaacattcaggtcgggttttccgtctccaatttgatgaattccagatagta
agtagttcccatgacgatacaattctcatatgggatttcctaaatgtacctattccagaa
ggtacacgttcaccatctcgtacctatacttacgtcacccaatga
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