Lottia gigantea (owl limpet): LOTGIDRAFT_52002
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Entry
LOTGIDRAFT_52002 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_52002
Enzymes [BR:
lgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOTGIDRAFT_52002
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LOTGIDRAFT_52002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
AAA
Motif
Other DBs
NCBI-GeneID:
20251208
NCBI-ProteinID:
XP_009043753
JGI:
52002
UniProt:
V4B429
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MEAWKNLFVPTPVLWALKSENMVAPTSIQALSIPHAIRDRLDILGAAETGSGKTLAFSIP
ILHHVLQHQETINSSKNNNIDDNGDNSQGQDNDENTSNDNSDNYDKSDNEVESVDLNELM
MEMSDVPDDDDDDDDDDNDSGVEDDEVYDSPPEEVDEEFMHNIVLDPKSTTVKTDKPLIA
LILEPTRELAIQVKNHIQKAAKYINVQIATVVGGMAPQKQRRILSHCPEIIIATPGRLWE
LLQEVNPHLIKIPTVKVLVVDEADRMVEKGHFEELSKLFEFMKENVESRLKRQTLVFSAT
LTMIHQGPNRRLKKKKKKVDPEDKLGLLMQHIGVKQKKKVIDLTNKTGTAGGLTEARINC
AKDEKHMMMMMMSRSFCFYSYVKFYLKQKMCFAILKMIFIVLSLKFPGNSDGFLLASDVA
ARGLDIPNVQHVIHYQVPRTIENYVHRSGRTARANQEGLSVMLISQDDVQNYRKIIKNLN
RDEELPVFPVEYQYIPLLKAQLRQALEIDKLDHRFTKVKRQNDWFSKAAEEMEIDIEDEK
LLVDLGDSEEQRRHGVKLEQLRSSLKQSLKQPLAPKTFSGKYPTKMGK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaagcttggaagaatttgtttgttccaacaccagtgttatgggcattaaaaagtgaa
aatatggtagctccaacatccattcaagccctgagcataccacatgctattagagataga
ttagatatcctaggagctgcagaaacaggaagtggcaaaacattagcatttagtatacca
atactacaccatgtcttacaacaccaagaaaccataaactcttctaagaataacaacatt
gatgataatggtgataattctcaaggacaagataatgatgagaatactagtaatgataat
agtgataattatgataaaagtgataatgaagtagaaagtgttgatttaaatgaactgatg
atggaaatgagtgatgtccctgatgatgatgatgatgatgatgatgatgataatgatagt
ggtgtagaagatgatgaggtatatgacagtcctccagaagaagtagatgaagaatttatg
cataatatagttttagatccaaagagtactacagtgaaaacagataagcctctaatagca
ttgatattagagcctaccagagaactagctattcaagttaaaaatcatatacaaaaagca
gctaaatatattaatgttcagatagctacagtagttggtggtatggctccacagaaacaa
agacgaatattaagtcattgtccagagattattatagccacacctggtagattgtgggaa
ctcttacaagaggtcaatcctcatctgattaaaataccaacagtaaaagtattagttgtt
gatgaagcagatagaatggtagagaaaggacattttgaggaattgagtaaattatttgaa
tttatgaaagaaaatgttgaatcaagattaaagagacaaactctggtattttcagccacc
ttaactatgatacatcaaggtccaaatagaaggctaaaaaagaagaaaaagaaagtggac
ccagaggataagttaggattattgatgcagcatattggtgtaaaacagaaaaagaaagta
atagatttaactaataaaactggtactgctggtggactaacagaggctagaattaactgc
gctaaggatgaaaagcatatgatgatgatgatgatgtcaagatccttctgtttttatagc
tatgttaagttctatttaaaacagaagatgtgctttgcaatcctcaaaatgatttttata
gtattatctttgaaatttccaggaaattcagatggatttcttctggcgtctgatgtagct
gctagaggtttagatatacctaatgtccaacatgttatacattatcaagtacctcgtacc
atagagaactatgtccatcgtagtggacgtacagctagagctaatcaggagggtctcagt
gttatgttgataagtcaagatgatgttcaaaattatagaaaaatcatcaaaaatctgaat
agagatgaagagttgccagtatttcctgtagaatatcaatatataccactgttaaaagct
caattacgtcaagctttagaaatagacaagttagatcatagattcaccaaagtaaaaaga
cagaatgattggttttctaaagctgctgaagaaatggaaatagatatagaagatgagaaa
ttattagttgatcttggtgacagtgaagaacagagaagacatggggttaaattagaacaa
ttacgttcttctttaaaacaatcattaaaacaacctctagcacctaaaacattttctggt
aaatacccaactaagatgggaaag
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