KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_66003
Entry
LOTGIDRAFT_66003  CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LOTGIDRAFT_66003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lgi03041]
    LOTGIDRAFT_66003
Spliceosome [BR:lgi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    LOTGIDRAFT_66003
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    LOTGIDRAFT_66003
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 20251760
NCBI-ProteinID: XP_009056854
JGI: 66003
UniProt: V3ZLZ8
LinkDB
Position
Unknown
AA seq 288 aa
MANRTVKDAHSIKGTNPQYLIEKIIRTRIYECRYWKEECFALTAALLVDKAMELKYIGGV
FGGNVKPTDFLCLILKMLQIQPEKDIVVEFIKNEDFKYVRALGAIYMRLTGTSLDCYKYL
EPLYLDYRKMKRMNRNGEFEILHMDEFIDELLREERVVDIILPRLQKRQVLEESNELEVR
VSPLEEDLDEMDTSEDEEVARSPSPERNQPRIKYQDVDKPKRSPSPKYKRSRSRSPHRRD
DDDRHRKSKKSKRDRHHRDEDRSHKDRGERSRDKRDKDRKRDRDNHHS
NT seq 864 nt   +upstreamnt  +downstreamnt
atggcgaatcgcacagtgaaagatgcgcattcaatcaaggggacaaatcctcaatatttg
attgaaaaaatcatcagaactcgaatatacgaatgtcgttactggaaagaagaatgtttt
gctctcacagctgctcttctggttgataaagctatggaattgaaatatataggtggtgta
tttggtggaaatgtgaaaccaacagattttttatgtcttatactcaaaatgttgcaaatt
caacctgaaaaagacattgttgttgaattcattaaaaatgaagatttcaaatatgttcgt
gcattaggtgctatatatatgaggttaacagggacatcattagactgttacaagtatcta
gaaccattatatttagattacagaaaaatgaaaagaatgaacagaaatggtgaatttgag
atattacatatggacgaatttatagatgagttattacgtgaagaaagagttgtagatata
attttacctcgattacaaaaaagacaagtattagaagaaagcaatgagctagaagttaga
gtcagtccattagaagaagatttagatgaaatggacacttcagaggatgaggaagtagct
agaagtccttcaccagaaaggaatcaacctagaatcaaatatcaagatgtagataaacca
aaaaggagtccctcacccaaatacaaacgtagtcgatctcggtctccacatagaagagat
gatgatgacaggcatcggaaaagtaaaaagagtaaaagagatagacatcatcgtgatgag
gatagatctcacaaagacagaggagaaagaagtcgtgacaaacgtgataaggacagaaaa
cgtgatcgtgataatcaccattca

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