Lottia gigantea (owl limpet): LOTGIDRAFT_72314
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Entry
LOTGIDRAFT_72314 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_72314
Enzymes [BR:
lgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LOTGIDRAFT_72314
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
LOTGIDRAFT_72314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
zf-CCHC
Helicase_C
zf-CCHC_3
ResIII
Cas3-like_C_2
Mso1_Sec1_bdg
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
20252047
NCBI-ProteinID:
XP_009057808
JGI:
72314
UniProt:
V3ZIT5
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
GSSNGFGSSGFGSKSGFGGNSDSVSGFGGGGNSGFSGSKGFGGGGGGKGCFKCGQEGHMS
RECPSGGGQSRGKGCFKCGEEGHMSRECPKGGGGGRGCFKCGEEGHMSRECPSGGGQSRG
KGCFKCGEEGHMSRECPNGSSGGSRSGFDSKGKGCFKCGEEGHMSRECPNQENKDGEKRE
IYIPPEPSTDEDEIFKSIEKGINFNKYDDIPVEVSGRSPVSFITSFDEAGLRDSFLKNVR
KAKYDRPTPVQKYAIPIIMAGRDLMACAQTGSGKTAAFVLPTITAMMNDGLKSSRFSEVQ
EPQAIVVAPTRELAIQIHLDARKFAHGTDLRSVVLYGGTSVGYQMKQVEQGAHFVVGTPG
RLLDTINKGKISLAKIKFLILDEADRMLDMGFEPDIRKLVETMGMPAKTERQTLMFSATF
PEEIQKLAADFLNDYLFVTVGRVGGANTDVEQMFYEIDRLQKRDKLCSILSETGTDRTLV
FVEQKRNADFLASYLSQSVFPTTSIHGDRLQREREEALLDFKTGKAPILVATSVAARGLD
IPGVKHVVNYDLPASIDEYVHRIGRTGRCGNLGKATSFYSHDSDSALCKSLVRILKEANQ
GVPSWLESYAASSMETSGTYRPGGKFGGKDIRRNGGGGGGQGQGGGDQWFDGGQAAGNVG
NTACGGDEEEWD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ggatccagtaatggctttggaagcagcggatttggttccaaaagtggatttggtggaaat
tcagattctgtcagtggttttggcggaggtggtaacagtggatttagtggctccaaaggt
tttgggggaggtggcggaggaaaaggctgcttcaaatgtggtcaagaaggtcacatgtcc
agagaatgtccaagtggcgggggacagtctagaggaaagggctgtttcaaatgcggagaa
gagggacacatgtcacgagaatgtcccaaaggaggtggtggaggaagaggctgcttcaaa
tgtggtgaagaaggtcatatgtccagagaatgtccaagtggtgggggacagtccagagga
aagggctgtttcaaatgcggtgaagaggggcacatgtcacgagaatgcccgaatggaagc
agtggtggaagccgttcaggatttgactctaaaggaaagggttgtttcaaatgtggtgaa
gaagggcatatgtcaagggaatgcccaaatcaagaaaacaaagatggggaaaagagagaa
atatatatcccaccagagcccagcaccgatgaagatgaaattttcaaaagtattgaaaag
ggaattaactttaacaaatatgacgatattccagtggaagtttctggtcgttcaccagtt
tcgttcatcacaagttttgatgaggctggtttgagagactcattcttaaaaaatgtgaga
aaggcgaaatatgacagaccgacaccagttcagaaatatgccattccaattattatggct
ggtagagatttgatggcctgtgctcagacaggctctggtaaaactgctgcattcgttcta
ccaactatcacagctatgatgaatgatgggttgaaatcaagcagattttcagaagttcaa
gaaccacaagcgatcgtagttgcccctacaagagagttggctattcagattcatttagac
gcaaggaaatttgcccatggtacagatttacgttcagtggtcttatatggtggaacttca
gttggatatcaaatgaaacaagttgaacaaggggctcattttgtggtaggaacccctggc
agactgttagatactatcaacaaaggaaaaatcagtttggctaaaatcaaatttctcata
ttggatgaagcagacagaatgctggatatgggatttgaacctgatatcaggaagttggtg
gaaacaatgggaatgccagccaaaaccgaaagacaaactcttatgtttagtgctactttt
cctgaagaaattcagaaacttgctgcagactttcttaatgattatctatttgtgacagtt
ggcagagtgggaggagccaatactgatgtggaacaaatgttttatgaaattgacagactt
caaaaacgtgacaaattgtgctcaattttgtcagaaaccggcactgataggacattagta
ttcgtggaacagaaaagaaatgctgatttcttagcttcatatctgagtcagtctgtattc
ccaactacaagtattcatggtgatcgtttacaaagggaaagagaggaggccttattagat
tttaaaactggaaaagctcctattttggtggctacaagtgttgctgccagaggtcttgac
attccaggagtcaaacatgttgtaaattatgatctaccagcatctattgatgagtatgta
catcgtattggccgcacaggaaggtgtggaaacctgggtaaagccacaagtttttactca
cacgattctgattctgctttgtgtaagagtttggtgagaatattgaaggaagctaatcaa
ggagttccttcatggttggagagctatgcagccagtagtatggaaactagtggaacatac
agacctggtgggaaatttggcggaaaggatatccgtagaaatggtggaggaggaggcggc
caaggtcaaggtggtggtgatcaatggtttgacggaggtcaggctgcaggaaatgtggga
aatacagcttgcggtggtgatgaagaggaatgggac
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