Lottia gigantea (owl limpet): LOTGIDRAFT_72491
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Entry
LOTGIDRAFT_72491 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03410
Base excision repair
lgi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOTGIDRAFT_72491
03450 Non-homologous end-joining
LOTGIDRAFT_72491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_72491
Enzymes [BR:
lgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOTGIDRAFT_72491
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
LOTGIDRAFT_72491
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
LOTGIDRAFT_72491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
20252052
NCBI-ProteinID:
XP_009052278
JGI:
72491
UniProt:
V3ZZB0
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
FIVKAGIEKARMKIFETQINKYGGSVKTELNDYVTHIIVDDKMDVDKLCRLIKADTPPQD
NLVVKSNWLSLCFRNKKLEDTAPYLLETFLSTKSEINCSDSDSGEDKNASKEKEADKQAY
KVGTMFNSHSKPKWNFSGTTDILMKIGIVKINVISASKWTCARSSKNPKPNVNQAITEKL
EEMIRNYESTNDKWRAFGYQKAVQAIRSHPNPISSWEEARNLRGVGAKLADKIWEIVQSG
ELRKLNEFKSSEEIKVLNIFNNVWGAGPTTARAWYQQGFRTLEDLKTKAKLTSQQKVGVR
LYDDILDRMSREEAGEIEEVVREAAESLQDGIIAQACGSYRRGKATCGDVDVLITHPDGK
SHRGIFSKLINLLTEQGFLTDHLVSVEDSGNQKKYLGVCKLKGDNRKHRRLDIIVVPYNE
YGCALVYFTGSAHFNRSLRHLAKKMNMSLNEHALKYGVVRKGGEKIHEGTLIPTPTEKSV
FEQFKIPYRPPEERD
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
tttattgtaaaagctggaattgagaaagccagaatgaaaatatttgaaactcagataaat
aaatatggcggttcagtgaagactgaattaaatgactatgttacacacattattgttgat
gacaaaatggatgttgataaactttgtcgtctgataaaagctgacacaccccctcaggat
aacttagtagtcaagtctaattggttaagtttgtgctttcgaaataaaaaactagaggat
acagcaccttacttgcttgaaacatttttatctacaaagtcagaaataaactgtagtgat
tctgactcaggcgaagataaaaatgcttctaaagaaaaggaagcagacaagcaggcctat
aaagttggaacaatgttcaatagtcattcaaaacccaaatggaatttttcaggaacaaca
gacatcttaatgaaaattggaattgtgaaaatcaatgttatcagtgcttccaaatggaca
tgtgctcgatcatcaaaaaatccgaaacctaatgtaaatcaagctatcactgaaaaatta
gaggaaatgatcaggaattatgaaagtaccaatgataaatggagagcgtttggttatcag
aaagcagttcaagctattagaagtcatcctaatcctatttcttcatgggaggaagctaga
aatttaagaggtgttggggcaaagctagctgataaaatttgggaaattgtacaaagtgga
gaattaagaaaattaaatgagtttaaatctagtgaagaaattaaagtgttgaatattttt
aataatgtttggggagctggtcctactacagccagagcttggtaccaacagggatttcga
actcttgaagatttaaaaactaaagccaagttaacaagtcaacagaaagtaggtgtgaga
ctatatgatgatatattagatagaatgtccagagaagaagctggtgaaattgaagaagtt
gttcgtgaagctgctgaatcactacaagatggtataatagctcaagcttgtggctcatat
cgacgtggtaaagccacatgtggtgatgtggatgtgttgattacacatcctgatgggaaa
tcacaccgtggtattttctcaaaattaatcaatcttctaacagaacaggggtttttaaca
gatcatctagtatcagttgaagatagtgggaaccagaagaaatatttaggtgtttgtaaa
ttaaagggagacaatagaaagcacagaagattagatattattgtggtaccttataatgaa
tatggttgtgctttggtttattttactggttctgctcatttcaatcgttctttaagacat
ttagctaaaaagatgaatatgtccttaaatgaacatgctttaaaatatggcgttgttaga
aagggtggtgaaaaaattcatgaaggaactttaatacctacaccaacagaaaaatcagta
tttgaacagtttaaaataccatatagacctccagaagaacgagat
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