Lottia gigantea (owl limpet): LOTGIDRAFT_82027
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Entry
LOTGIDRAFT_82027 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K16498
protocadherin delta 1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
LOTGIDRAFT_82027
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lgi01009
]
LOTGIDRAFT_82027
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lgi04515
]
LOTGIDRAFT_82027
Protein phosphatases and associated proteins [BR:
lgi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
LOTGIDRAFT_82027
Cell adhesion molecules [BR:
lgi04515
]
Cadherins
Protocadherins
LOTGIDRAFT_82027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_pro
Sde0182_C
DnaJ-like_C11_C
Motif
Other DBs
NCBI-GeneID:
20252523
NCBI-ProteinID:
XP_009055278
JGI:
82027
UniProt:
V4BXV2
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
YTLLEEKPKGFFIGKISDNVDLPLVLTDNATESLRYSFLTQGYPHSAFFNLTKDGLLYTS
KQLDREDLCGFMDTCILEAEIAIQSTVNQFFRKEKLTVILQDINDHSPTFSSDSITLKIS
EAVSVNSSFILESALDRDVGENSLQGYNLVSDTDNFGIRVTKTLDGGTVVSLVVLRPLDH
EERHFYEIVIVAKDGANPPNTGALSVNISVVDVNDNPPVFAAQKYNTTVNESAPINTSVT
QVKATDRDSGINNVSQYRFSPLVPRDVKKYFHLDKSSGKITVSKSLHPIQGQTMQFIVEC
LDGGSPPLVAQAQVTINVEDSTNNPPSINLNLFENAEVSENASPGLTVGHVAVLDPDSDQ
NGLVRCSLFGDSFDIQGLGLNEYRVIVARKLDRERKATHKIVLTCKDAGKPQLNDTISFQ
IKIRDENDHAPIFRQMKYTGNISENTSPGQLILKVSAFDKDIGENSRITYIIPKSDEHGI
KIDEHGQIISDRVFDRENTSQITFQVIAKDNGYPVQNASCTVTIFVMDVNDVRPKFQKPR
YLFRTDENRLSGTIIGRINADDDDEGLNGEILYSIQLKFEELEYYPIKVTSEGTIRTTFP
LDREIKSRYEFSVIASDRGTPSLSSSVEVIVEVNDQNDHAPEFVSPSSTNHSLSVPFHMH
TNYALFTVIAKDKDEGANAYLEFILFPEDGHGMFKIESKSGVIRLSRFLTPNDIGIFELE
VIVQDLGRPSLNSSVNFNITV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
tatacactcttggaggaaaaaccaaaaggattttttatcggcaagatctctgataatgtt
gatcttccacttgttttgacagacaatgccacagaatcgctccgttatagctttttaact
caaggttatccacacagcgcgttctttaacttgacaaaagacggtctcctctacacatca
aaacagttggatagagaagatctttgcggatttatggacacatgcatcttagaagccgaa
atagcaattcaatcaacagtgaaccaattttttaggaaagaaaagttaacagttatttta
caagatataaatgaccattcgccgacattcagcagcgattcaataacactcaaaatttca
gaagcagtttctgtcaactcgtcctttatcttagaaagtgccttggatcgtgatgtcgga
gaaaattcgcttcagggatataatctggtgtctgatactgataattttggcatacgcgta
actaaaaccctggacggtggaacagttgtaagtcttgttgtgctccgtcctttagatcac
gaagagcgacatttctatgaaatcgtgattgttgccaaagatggtgctaatccaccaaat
acaggtgctctttctgtgaacatttccgtagttgatgtaaacgacaaccctccagtgttt
gctgcacagaaatataacacaactgtgaatgagagtgctcctattaatacgagtgtaact
caagttaaggcaactgatcgcgactctggtatcaataatgtttctcaatatcgtttcagc
cctcttgtgccacgggacgtcaaaaagtattttcacttggataaatcctcagggaagatt
accgtctcaaaatctctacaccctattcagggacaaactatgcaatttattgtggaatgt
ttggatggaggatcacctcctttagttgcgcaagctcaagtaactatcaacgttgaagat
tcaactaacaatccaccatcgatcaacttaaatctttttgaaaatgctgaagtttctgaa
aatgcttcgcctggactgactgttggtcatgttgcagtgttagatccagattctgatcag
aatgggttagttcgttgctctctttttggcgattcctttgatatccagggtttgggacta
aacgaatatagagtaattgtggccagaaagcttgatagagaaaggaaagctacacacaag
atagttttaacttgtaaagatgcagggaaaccccaacttaatgacaccatttcattccaa
attaaaatacgagatgaaaacgaccacgcaccgatcttccgacaaatgaagtatacaggg
aacataagtgaaaacacaagcccaggccagttgatacttaaggtatctgcctttgacaaa
gacattggcgaaaattctcgtataacgtacatcataccgaaaagtgacgaacatggcata
aaaattgacgaacatggacaaattatttcagatcgtgtttttgatagagagaatacatct
caaattacgtttcaagtcatcgctaaagataatggataccctgtacaaaatgcgtcttgt
acagtcacaatctttgtaatggacgttaatgacgttagacctaaatttcagaaaccgaga
tatttattcagaacggacgaaaatcgactctctggaacaataattggtcgaatcaatgca
gatgacgacgacgaaggtttaaacggtgaaatactatacagtattcagctaaaatttgaa
gaattagaatactacccaattaaagtaacatctgaaggtacaatacgaacaacatttcca
ctggatcgtgaaataaaatctcggtacgaattttctgttattgcctctgatcgtggaaca
ccgtcactatcgtcttccgtagaagtaattgttgaagtgaacgaccaaaacgaccatgca
ccagaattcgtttcaccaagctccacaaatcattctttgtcagtaccgtttcacatgcac
actaattatgctttgttcacagttattgctaaagacaaagacgaaggcgcaaatgcttat
ttagaatttatactttttcccgaagatggacacggtatgtttaaaattgaatccaaatca
ggcgtcattcgcttatctagatttctcactccaaacgatataggaatatttgaacttgaa
gttattgttcaagatctcggccggccatccttaaattcgtctgtgaacttcaacataaca
gtt
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