Lottia gigantea (owl limpet): LOTGIDRAFT_92934
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Entry
LOTGIDRAFT_92934 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lgi
Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_92934
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
LOTGIDRAFT_92934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
DUF1421
zf-CCCH_4
zf-CCCH
zf-CCCH_2
UBA_3
zf_CCCH_4
PRORP
Omega-toxin
zf-CCCH_DUS3L
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
20252960
NCBI-ProteinID:
XP_009060236
JGI:
92934
UniProt:
V3ZDK1
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
SDPDHSNHVEKALRLGFSEDQIVAVLKKLGTTAGSVDPNTLLSELIKEGATSSDSTINLA
PFVEDICDNNDNVILPENADDSSNLKPIVIDGSNVAMSHGYKEVFSCRGIKLAVDYFRQR
GHKKITVFVPQWRKETSRPGAQIKDQEIMRQLEKEKVLVFTPSRRIGGKRVVCYDDRFIL
DLAHDKNGIVVSNDNYRDLHNEKTQYKKVAEEQLLPYLFAEDKFMPPEDPLGKHGPTLDN
FLRIKPVVSEPLQPCPYGKKCTYGNKCRFAHPERGNRPQRSVTDILSEQSYQKIKDR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
tcagatcctgatcattctaatcatgtagagaaagcattaagacttggtttttctgaggat
cagattgtagcagttcttaaaaaattgggtacaactgctggcagtgttgatcctaatact
ctgttatcagaactaattaaggaaggtgccacatcatctgattctactataaacttagca
ccatttgtggaggacatttgtgataataacgataacgtgatattaccagagaatgctgat
gattctagtaatttaaaacctattgtaatagatggtagtaatgtcgctatgagtcatggt
tataaggaagtattttcatgtcgcggtataaagttagctgtagattattttagacagaga
ggacataaaaagataacagtttttgtaccacaatggcggaaagaaacttcaagaccaggt
gctcaaataaaagatcaagaaatcatgagacagctagaaaaagaaaaagtacttgtgttt
acgccatcgcgaaggataggtggtaaaagagttgtttgttatgatgacagatttatatta
gatttagctcatgataaaaatggcattgtggtatcaaatgataattatagagatctccat
aatgaaaagactcagtataaaaaagtggcagaagaacaactcttaccttatttatttgct
gaagacaaatttatgccaccagaggatccattaggaaaacatggaccaacgctggataat
ttcttaagaattaaacctgttgtttctgaaccattacaaccctgtccatatggtaaaaaa
tgtacttatggtaataaatgcaggtttgcccatcctgaaaggggaaaccgaccacaacgt
tctgttacagatatattatcagaacagagctatcagaagattaaagataga
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