Lottia gigantea (owl limpet): LOTGIDRAFT_95079
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Entry
LOTGIDRAFT_95079 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K12850
pre-mRNA-splicing factor 38B
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOTGIDRAFT_95079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_95079
Spliceosome [BR:
lgi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
LOTGIDRAFT_95079
Complex C
U4/U6.U5 tri-SnRNP related factors
LOTGIDRAFT_95079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PBP_like_2
Motif
Other DBs
NCBI-GeneID:
20253033
NCBI-ProteinID:
XP_009050343
JGI:
95079
UniProt:
V4AYJ2
LinkDB
All DBs
Position
Unknown
AA seq
190 aa
AA seq
DB search
NNTLAVWGNEKTMNLNNLILTNIQSSPYFKINLFNLKTYHEVIDEIYYKVSHLEPWEKGS
RKTAGQTGMCGGVRGVGAGGIVSSAYCLLYKLYTLKLTRKQLNGLLTHSDSPYIRGLGFM
YIRYTQPPADLWEWYEPYFDDDEEVDVKAGGGHVMLIGEMIRQWLVKLEWYSTLFPRIPV
PIQKDIDSKI
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
aacaatacactagctgtgtggggaaatgagaagacaatgaatttaaataatcttatttta
accaatatccaatcctcaccatattttaagattaatttatttaatttaaaaacatatcat
gaagttattgatgaaatatattataaggtgtcacatcttgagccatgggaaaaaggaagt
agaaaaactgctggtcaaacaggcatgtgtggtggggtacgtggtgttggagctggggga
atagtttctagtgcttattgtttattatataaactttatacattaaaactaacaaggaaa
caactaaatggtttattaacacattcagattctccgtatatcaggggactaggatttatg
tatattagatatacacagcccccagcagatctatgggaatggtatgaaccttattttgat
gatgatgaggaagttgatgtaaaggctggtggaggacatgttatgttaattggtgaaatg
atacgacaatggttagtaaagttagaatggtattcaactttatttcctcgtataccagta
ccaatacagaaagatatagatagtaaaatt
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