Lactobacillus gallinarum: AO203_00795
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Entry
AO203_00795 CDS
T04115
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lgl
Lactobacillus gallinarum
Brite
KEGG Orthology (KO) [BR:
lgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgl03019
]
AO203_00795
03009 Ribosome biogenesis [BR:
lgl03009
]
AO203_00795
Enzymes [BR:
lgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AO203_00795
Messenger RNA biogenesis [BR:
lgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AO203_00795
Ribosome biogenesis [BR:
lgl03009
]
Prokaryotic type
rRNA helicases
AO203_00795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ALJ22635
LinkDB
All DBs
Position
complement(128701..130062)
Genome browser
AA seq
453 aa
AA seq
DB search
MNNIFADSRIKPAIQEGLKKIHFEKPTKVQEKVIPAMLSDLSVVVQAATGSGKTHAYLVP
IFNEIDEDAHYVQAIVTLPSRELADQLYQVARQLRDAAGMHFSIAHLAGGTDRERQLEKY
QNNTPQLVIATPGRLLDFVQKKVFVVDQVKTFVIDEADMTLDIGFLADIDQVASKIPKDV
QIAAFSATIPVNLSNFLRKYMAHPDQIVIDNPSVIAPTIKNDLLDIGSKNRKSVLYKLLT
MGQPYLALVFANTKQTVDELTRYLQDQGLKVAKIHGRVTERERKRTLRQVEQGQFQYVVA
SDLAARGLDIDGVSLVINYEIPRDIEFVIHRIGRTGRNGLSGHAITLIREEEMNRIEDLE
KMGVHFDFVEIKNGELVPRKHYRSRENRQGKNRKLDTKLVVYVKKEKRKRKPGYKKKIKR
AIQEDNRQKRKLEQRHEIRKAKRLRKHKREQGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattttcgcagattccagaattaaaccagctattcaagagggtttaaagaag
atccattttgaaaagccaactaaggtgcaggaaaaagttattccagcaatgctttctgat
ttaagtgttgtggtgcaagctgcaaccgggtcaggtaagacgcatgcttatttggtgcct
atctttaatgaaattgatgaagatgctcactatgtgcaagcaattgtgactttgcctagt
cgagagcttgctgatcaactttatcaagtagcacgtcaattaagagatgcggcagggatg
cacttttctattgcccaccttgctggtggaacggaccgtgaacgtcagttagaaaagtac
caaaataatacgccacagttggtaattgccactccgggacgacttttggactttgtacaa
aaaaaggtattcgttgttgatcaagttaagacttttgtcatcgacgaagctgatatgact
cttgacataggctttttggctgatattgatcaagtagcaagcaagatacctaaggatgta
caaattgcagccttttcagctactattccagttaatctatctaactttttgcgtaagtac
atggctcatccagatcaaatcgtgatcgataatccaagtgtcattgcacctacaattaag
aatgatttgcttgatattggctcaaagaatcgtaagagtgttttgtacaagttattgact
atgggtcaaccttacttggctttggtttttgctaatacaaaacaaactgttgatgaatta
actagatacttgcaagatcaaggcttaaaggtagctaagattcatggtagggtaactgag
cgagaaagaaagcggactttgcgtcaagttgagcaaggacaatttcaatatgttgttgcc
tctgacttagcagcccgtggtcttgatatcgacggtgttagtttagttattaattatgaa
attccacgtgatatcgaatttgtaattcaccggattggtcgtaccggccgtaatggttta
tcaggtcatgcgattactttaattcgtgaagaagaaatgaaccggatcgaagatttggaa
aagatgggcgttcatttcgactttgttgaaattaagaatggtgaattagtaccacgtaag
cattaccgcagtcgtgagaatcgtcagggtaagaatcgcaagcttgatactaagttagta
gtttacgttaaaaaggaaaaacgtaagcgtaagcctggctacaagaagaagattaagcga
gcaattcaagaagataatcgtcaaaagcgtaagcttgaacaacgtcatgaaattagaaaa
gctaagcgtttgagaaagcataagcgtgaacaaggacgttaa
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