Lactobacillus gallinarum: AO203_01615
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Entry
AO203_01615 CDS
T04115
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lgl
Lactobacillus gallinarum
Pathway
lgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AO203_01615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgl03019
]
AO203_01615
03009 Ribosome biogenesis [BR:
lgl03009
]
AO203_01615
Enzymes [BR:
lgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AO203_01615
Messenger RNA biogenesis [BR:
lgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AO203_01615
Ribosome biogenesis [BR:
lgl03009
]
Prokaryotic type
rRNA helicases
AO203_01615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ALJ22774
LinkDB
All DBs
Position
complement(281062..282561)
Genome browser
AA seq
499 aa
AA seq
DB search
MKFSELGLNDTLLKAIKRSGFEEATPIQEQTIPLALQGKDVIGQAQTGTGKTAAFGLPIL
QSTDKKEKAIQAIIIEPTRELAIQTQEELFRLGRDEHAHVQVVYGGADIGRQIRSLKQHA
PSILVGTPGRLLDHLKRGTIDLDKVNTVVLDEADEMLDMGFIKDIESILKYAKNCKQTLL
FSATMPKPILRIGEKFMKEPAIVQIKAKELTADLIDQYFVRAKESEKFDIMCRLIDVQGP
DLALVFGRTKRRVDELTRGLQARGYNAAGIHGDLSQARRMAVLKRFREGKLDILVATDVA
ARGLDISGVTHVYNYDIPQDPDSYVHRIGRTGRAGQNGVSVTFVTPNEIGYMRTIERLTK
KKMSPLRLPTDDQALRGQLKQAKAEIEDLMNGDLGKYTQDASELLDNYSALDLVAAFLKN
LAKDSTDIKVKITPEKPLSYKGDGRHGRGRRGHNDHGRGRGHGNYHRRRNSNNDYRHDGN
RGRRGRGNGHEFAIKNKKD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttttcagaattaggattaaacgatacgcttcttaaagcgattaaacgctcaggt
tttgaagaagcaaccccaatccaagagcaaactattccacttgctttgcagggaaaagat
gtaattggacaagcacaaactggtactggtaagacagcagcatttggtttgccaattttg
caatctactgataaaaaagaaaaggcaatccaagcaattattatcgaaccaacgcgtgag
cttgctattcaaacacaggaagaattattccgcttgggtcgtgatgaacatgcccatgta
caagtggtttacggtggagcagatattggccgccagattcgttcattaaagcagcatgca
ccatcaattttagttggtacgccaggtcgattattagatcacttaaagcgtggcacaatt
gatttagataaagttaatacagtagttttggacgaagcagatgaaatgctcgacatgggc
tttatcaaagatatcgaaagcattttgaagtatgctaaaaactgtaagcaaactttgctt
ttcagtgctactatgcctaagccaattttacgaattggtgaaaagttcatgaaggagcct
gctattgttcaaattaaggctaaggaattaacagctgacttaattgatcaatattttgtt
cgtgccaaagaatccgaaaaatttgacattatgtgtcgtttgattgatgttcaaggccca
gacttggcacttgtattcgggcggactaaacgccgcgtagatgagcttacacgcggattg
caggcacgtggctataatgctgcaggtattcacggagacttgtctcaagcacgtcgtatg
gcagtcttgaagcgattccgtgagggtaagttggatattttagttgctactgatgtggca
gcacgtggtttggatatttcaggagtgactcacgtatataattatgatattcctcaagat
ccagattcttatgttcaccgtattggtagaactggtcgtgcgggacaaaatggtgtttca
gtaaccttcgtaactccaaacgaaattggctacatgagaactattgaacgacttactaag
aaaaagatgtcaccacttcgtctaccaacagatgatcaagctcttcgtggtcaattaaag
caagctaaggctgaaatcgaagacttaatgaatggcgacttgggtaagtacactcaagat
gctagtgagcttcttgataattactcagctcttgatttggtagctgccttccttaagaat
ttggctaaggattcaacggatatcaaggttaaaattacgccagaaaagcctttgtcatat
aagggtgatggtcgtcatggacgtggacgccgtggacataatgatcacggtcgtggtcgc
ggacatggaaattatcatcgtcgccgcaatagtaataacgattaccgtcatgatggtaat
cgtgggcgtcgtggacgtggcaacggacatgaattcgcaatcaagaataaaaaagattaa
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