Lactobacillus gallinarum: AO203_06195
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Entry
AO203_06195 CDS
T04115
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lgl
Lactobacillus gallinarum
Pathway
lgl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AO203_06195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgl03400
]
AO203_06195
DNA repair and recombination proteins [BR:
lgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AO203_06195
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AO203_06195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
nSTAND3
nSTAND1
AAA_29
AAA_23
AAA_22
DnaJ_CXXCXGXG
AAA_33
AAA_21
AAA_15
Viral_helicase1
NACHT
BCA_ABC_TP_C
RNA_helicase
Mtrc-MtrF_II-IV_dom
cobW
NB-ARC
MMR_HSR1
T2SSE
AAA_24
DUF1924
Aq_aa27
DUF87
Septin
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
ALJ23468
LinkDB
All DBs
Position
1209036..1211876
Genome browser
AA seq
946 aa
AA seq
DB search
MVNDKIVIRGAREHNLKDIDVTIPKNKLVVVTGLSGSGKSSLAFDTLYAEGRRRYVQSLS
SYARQFLGQMDKPDVDSIDGLNPAISIDQKTTSHNPRSTVGTVTEINDYLRLLWARVGHP
ICPNDRTLIERQSVDQMVDRIMALPERTKIQLLAPVIRAKRGEHKDVFKRVQRTGYVRVI
VDGEMHEIGEEFNLAKNKRHNIDIVVDRLIVKDSIKSRLFDSIESALRLSDGYMNVDVIG
DEMLNFSEYYACPKCGFTVGEMEPRLFSFNAPFGACPDCDGLGMNLAVDEDLVVPDKSKT
LAEGALAPWKTSNYYTEMLEQACAALDIPMDKPFNKLTKKQRETILHGSTKPVKFHVTGD
FGVNDTTQPFEGVMDNVERRYKHPMSKFMRDVMGKYMTELTCSTCHGKRLNEKALAVKVM
GKDIAEASELSINKSLDFFKSVKLSEQETVIAKPILKEVCDRLSFLDSVGLDYLTLSRSA
NTLSGGEAQRIRLATQIGSNLSGVMYVLDEPSIGLHQRDNDRLIASLKRMRDLGNSLIVV
EHDNETMRQADYLIDMGPGAGVYGGEVMAQGTPEEVEKNPKSLTGQYLSGKKFVPVPLKR
RKGNGKKITITGAQENNLKNINVDFPLGKFIVVSGVSGSGKSTLVNMILKRALAQKLNHN
STKPGKYKSIRGYKNIEKIIDIDQSPIGRTPRSNPATYTSVFDDIRTLFAQTNEAKMRGY
TKARFSFNVKGGRCEACHGDGIIKIEMNFLPDVYVPCEVCHGSRYNSETLEVTYREKNIA
QVLDMTINEACKFFENIPKIARKLQTIVDVGLGYVKLGQSATTLSGGEAQRMKLAAELQK
LSTGKNFYILDEPTTGLHTDDIKRLLEVLQRLVDEGNTVLVIEHNLDVIKNADWIIDLGP
EGGEGGGNVVATGTPEEIAEVKESYTGQYLKPVLKRDTKLTRDAEK
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgataagatcgttattcgtggtgcacgagaacataatttaaaagatatagat
gtaactattcctaaaaataaattagtagtagttactggtctatcgggatctggtaagagt
tctttagcctttgataccttatatgccgaaggtagaaggcgttatgtgcaatcactttct
agttatgctagacaattcttgggtcaaatggataagccagatgttgattcaattgatgga
ttaaatcctgctatttcaattgatcaaaaaactacctcacataatccgcgttcaactgta
ggaacggtaacggaaatcaatgactatttgcgtcttttgtgggctcgtgtaggtcatcct
atttgtcctaatgatagaactttaattgaacgacaatcagttgatcaaatggtagatcgc
atcatggctttaccagaaagaacgaaaattcaattattagcccccgttattcgagctaaa
cgtggtgaacataaggatgtttttaagcgagtacaacgtacaggctatgtccgtgttatt
gtcgatggcgagatgcatgaaattggcgaagaatttaatttagctaaaaataagcgtcat
aacattgatattgtggtagatcgcttgatcgtgaaagacagcattaaatctcgtttgttt
gactcaattgaatcagcacttcgtttatccgatggctacatgaatgttgatgtcattggc
gacgagatgcttaacttttccgaatattacgcttgtcctaagtgtggctttacagtagga
gaaatggaaccaagactcttctcatttaatgcgccatttggtgcttgtcctgattgtgat
ggattaggcatgaatttagcagttgatgaagacttggttgtgcctgataagagtaaaact
ttagcagaaggtgcattagctccttggaagacgtccaattattatactgaaatgttggag
caagcctgtgcagcactcgatattccaatggataagccttttaataaattgactaaaaag
caaagagagacaattcttcacggttcaactaagccggttaaattccatgttactggtgat
tttggcgtcaatgatacaacccagccatttgaaggagtaatggataatgtcgaaagacgt
tataagcatccaatgtctaaattcatgcgtgatgtaatgggcaagtatatgacagaactg
acttgttcaacttgtcacggtaaacgattgaatgaaaaagctctggctgtaaaagtgatg
ggtaaggatatcgctgaagcttctgaactttcaattaataaatctttggatttctttaag
agcgtcaaattaagcgaacaagaaactgtgattgctaagccgattttgaaagaagtatgt
gatcgtctttcattcttggatagtgtaggattagattatttaactctttctcgttctgct
aatactttatctggtggggaagctcaacgtattcgtttggctactcaaattggttctaac
ttgtcaggagttatgtatgttttagatgaaccttcaattggacttcatcaacgtgataat
gatcgattaattgcttcacttaagagaatgcgggacttaggcaattccttgattgtggtt
gaacatgataatgagaccatgcgtcaagccgattacctgattgatatgggaccaggtgcc
ggtgtatatggtggtgaggtaatggctcaaggtacgccagaagaagtagaaaagaatcct
aaatcattaactgggcaatatttgtctggtaaaaaatttgttcctgttccattgaagcgt
cgtaagggcaatggtaagaagatcactattactggtgcacaagaaaacaatttgaagaat
atcaacgttgattttcctttaggaaaatttatcgtagttagtggtgtttcaggttcaggt
aaatcaaccctggttaacatgattttaaagcgagcattggctcagaaattaaatcataat
tcaactaagccaggcaaatataagtcgattcgtgggtataagaatattgaaaaaataatc
gatattgatcaaagtcctattggacgtactccacgcagtaacccagctacttataccagt
gtatttgatgatattcgtacgctctttgcccaaacaaatgaagctaagatgagaggctat
actaaagcacgtttttcatttaacgttaaaggcggccggtgcgaagcatgtcatggtgac
ggaattattaagatcgaaatgaacttcttgccagatgtgtatgttccatgtgaggtttgt
cacggcagccgttataattcagaaactttggaagtaacttatcgtgaaaagaatattgct
caagtgcttgatatgaccattaatgaagcatgcaagttctttgaaaatattcctaaaatt
gcacgtaaactgcaaaccattgtcgatgtagggttaggctatgttaaattaggtcaatct
gctacaactttatctggtggagaagcccaaagaatgaagttagcggcagagttgcaaaaa
ctgtcaactggtaagaatttctatattttggatgaaccaacgacaggtttgcatactgac
gacattaaacgtttgcttgaagttctgcagcgtttagttgatgaaggaaataccgtttta
gtaattgaacataatttagacgtgattaaaaatgccgattggattattgatttaggacct
gaaggcggtgaaggtggtggcaatgttgttgctacaggaacgcctgaagaaatagctgag
gtaaaagagagctatactggtcaatatttaaagccagttttaaagcgtgatactaaatta
actagggatgcagaaaaataa
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