Leguminivora glycinivorella (soybean pod borer): 125224947
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Entry
125224947 CDS
T09956
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgly04121
]
125224947
Ubiquitin system [BR:
lgly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
125224947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
125224947
NCBI-ProteinID:
XP_047984423
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All DBs
Position
3:21436442..21493198
Genome browser
AA seq
1623 aa
AA seq
DB search
MLKLVSINRFKVAGASNSNGKGGRQAAPVDVGSPLLDWEEGDHFSFEDSERFEGDSLCSW
SSEPESLCNNWRGWRRPNLQNSFGNRSAKKSVQEKTVSTLSELAAKCVACHIPFELVEHV
YPPVPEQLQLQIAFWSFPDSEDDIRLYSCLANGSADEFQRGEHLFRDRAVKDVLQIGFHL
SATVSFNMPRAQFNVAVTFDRQRISSCNCTCSSTAHWCSHIVAVCLYRIHLPTQVCLRAP
VSESLQRLRRDQLQKFAQYLISELPRQVLPTAQRILDELLSAQPNQINTTCGAPDPTAGA
SAYEYTSWFLDEKTLHNNINKILVKFCVPAPIVFSDVNYLSTSAPPAAAEWSSLLRPLRG
REPEGMWNLLSIVREMFKRSDRNAIPLLEIITEEVMACEQIIVWWYSTKAALVAWGGGGK
HGGSGNSAAQHACSSLCDEVVVLWRLAALNPGLAPHERDTLHEQFTQWHMKVLDKVAKNR
NNHMGSSSSHTRHTRTHSHPPYINGISENEVFPGFQPAMEACYLEWDDYQIPGVTYTKDL
NPLYHSPFTIFRHADKQTDVHQVNSSKAVLNNEMSLSYRLTNPDPHRALVHRTRINVDLA
IPGPSGQQPCGSGEGSSDQPGPSDGNHSSVSSEGFCENEEEILVASGVDTDSQESSSPAV
SSDDAARRVSNDDSVSDDDCNLYFYDTAAARRAVAGEGTSGTAVQCSASATSGWECGWEV
SFARAEGLQAHGHAREACALGARLAQELLARPPALGSSTGGANSHDMRKARRRHMPSPRL
CAASHRLSCLASATLAKCAFLCTVLAEFSEHHELAFRVGLFALEMARPPASTKALEVKLN
NQETELVALLKKLPTGPEQLALAREKAEQLRDGMLRNRGPALLPIALASFLFDVLVLSAT
DKENKHPVSRKARQPSDEALGFEAAVAALGLKANVSEAEHPLLCEGTRRQRGELALTLLA
FYKDDSVKLARIMNKLLDRDIHQLTKGPMVSVYYTNNPRLAAHRDAQPPPAPAPAPPPPF
NHLRKMTYSYAPQQVHNQVQCQLVAEMERLVVSEGGASPPAHPPPHQPPHQTLARPKDSR
YKGKRLYPSVPNQPSEASAHFMFELAKSVLFKAGGSSSTSLFTQTSCAREHHGPHRGLHM
AAFQLGLYALGLHNCVSANWLSRTYSSHVSWITGQAMDIGAPAILFLIDAWEGHLTPPEA
AGIADKASSGRDVHTVRAAAELALSVLPHAHALNYNEIQRAVLQCKEQSDAMLERACLTV
EAAAKGGGVYPEVLYTVARYWHELYLRQANEDTEPLLEEPQYRAAPPVHLPVPYPLPYPF
TYHPYPPIYQLQYGGAPPPHAVSGQYALPPYFVRGLVPHAPLAPLPAHPAHPPHQQMPQH
QLQHPPPLPVNVNHGAPIPPPLPAIAGVAGVASVGPVAGHGGVGVAAPLPAPVAPPLPQA
QLRRLLAAYRVGMLALETQARRVHDDRPQNKFGRNPPYGEHVKWLLRISKRLGAQYLHQF
CVCAVNSVVSPFVLYELCVESAHWLARGGPHHLLMQHLRGTLAPLVQKCQQMYIQCIHQK
LYHLTPVEYEEFVSIVLSARTAFQLTPEGNTQFKEWLASLRRSKSCKKDLWTQLNAALQT
NGK
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaattagtgtcgataaatcgctttaaagtggcgggggcgtcaaatagcaatgga
aaagggggccgacaagctgccccggtcgacgtggggtctcccctgctcgattgggaagag
ggtgaccatttcagttttgaggactcggaacgtttcgaaggtgattcgttgtgcagttgg
agctcggagcctgagagcctgtgcaacaactggcgaggatggagaaggccgaatctacag
aactcattcggcaaccgttccgcgaaaaagtccgttcaagaaaagacagtatcaactcta
agcgagttagcagcaaagtgcgtggcctgccacataccgtttgaactagtagaacatgtg
tacccacccgttccggagcaactgcagctacagatcgccttctggagctttccggacagc
gaggatgacatcagactgtattcatgtctggcaaatgggtcagcggatgagttccaacgc
ggcgagcacttgtttagagatagagcggttaaagatgtgctacagattggtttccacttg
tcagccacggtgtcgttcaacatgccacgagcccagttcaacgtggcagtgacgttcgac
agacagcgaatatcgtcgtgtaactgcacttgctcgtccacagcgcactggtgctcgcat
atcgtcgccgtgtgcctttacaggatacatttgccaacacaagtatgcctgcgagcgcct
gtatccgagtccctccaacgtctcagacgcgaccaactccagaagtttgcacaatacctt
atatcagagctgcctcgtcaagtcctccccacggctcagcgtatactggacgagttgcta
tccgcccagccgaaccagattaacacgacctgcggggcgccggatccgaccgccggagcg
tccgcgtatgaatatacgtcgtggttcctggatgagaagaccttgcacaacaatatcaat
aagattttagtcaagttctgtgttcctgctcctatagtctttagtgacgtaaactaccta
agcacaagtgcgcccccggccgcagctgaatggtcgtcccttctccggcccttgcgcggc
cgagaaccagaaggcatgtggaacctactatccatcgtgcgagagatgttcaaacggagc
gacaggaacgctataccacttctggagatcatcactgaagaggttatggcgtgtgaacag
ataatagtgtggtggtacagcacaaaagcagcgctagtggcttggggcggcggcggcaag
cacggcggcagcggcaactccgccgcgcagcatgcttgttcatctctatgcgatgaggtt
gtggtactctggcgtcttgctgccctgaatcccggcctggctcctcatgagcgtgacact
ttgcacgagcaattcactcagtggcacatgaaagtgttggataaggtggccaaaaatcgc
aacaaccacatgggcagctcatcatcccacactcgccacacaaggacccactcccacccc
ccctacatcaacgggatatcagaaaacgaagtgttccccggcttccaacctgctatggag
gcctgctatctagagtgggacgactatcagatacccggagtgacatacactaaggacttg
aacccgctgtatcacagcccgttcactatattcagacatgctgataaacagacggatgtg
catcaggtgaattcctcaaaagcagtattaaacaacgagatgtctttgagctaccgtctc
accaacccagatcctcaccgcgccttggtacaccggaccagaatcaatgtggacttggcc
atccccggaccttcaggacaacaaccttgtggctcgggtgaaggcagcagtgaccagcct
gggcccagtgatggaaaccattccagtgtttcatctgaaggtttctgcgagaacgaagaa
gagatactagtagccagcggcgtcgacacagactcgcaagagtccagctctcccgcagta
tcatcagatgacgcggcgcgacgcgtatccaacgatgactcggtgtctgatgacgactgt
aacctgtacttctatgatacggccgctgctaggcgcgctgtggccggcgagggaactagc
ggcactgctgtgcaatgctccgcctcggccacaagcggctgggagtgcggctgggaggtg
tcgttcgcgcgcgccgagggcctgcaggcgcacgggcacgcgcgcgaggcgtgcgcgctc
ggcgcgcgcctggcccaagagctgctggcccgcccgccggcgctaggttcgagcacaggc
ggtgccaacagccacgacatgcgaaaagcgcgccgtcgccacatgccgtctcctcgacta
tgcgcggccagtcatcgactgtcctgtctagcgtcagctacgttggccaaatgcgccttc
ttatgcaccgtcctagcagaattcagcgagcaccacgagttagctttccgcgtggggcta
ttcgcactagaaatggcgcgacccccggccagcacgaaagccctagaggtcaaactcaac
aaccaggagactgagctagtagcgctgttgaagaaactccctactggccccgaacaacta
gctttagctagggagaaggctgagcaacttcgtgatggcatgctgagaaatcgaggacca
gcgctactacctatcgcgttggccagttttctgttcgacgtcctagttttatctgcgact
gacaaggaaaacaagcatcctgtaagtagaaaggcgagacaaccttcagatgaagcatta
ggcttcgaggcggcagtggccgctctaggcctgaaggcgaacgtgtccgaggcggaacac
cctttattatgcgagggcacaagacgccagcggggagaactggccttgacgctcttggcc
ttctacaaggacgactctgtcaagctggccaggattatgaacaagctgctggaccgcgac
atccaccagctgacgaagggcccgatggtgagcgtgtactacaccaacaacccgcgcctc
gccgcgcaccgcgacgcgcagccgccgcccgcgcccgcgcccgcgccgccgccgcccttc
aatcacttgagaaagatgacgtactcgtacgcgccgcaacaggtacataatcaggtgcag
tgtcaactagtggccgaaatggagcgattggtcgtgtcggagggcggcgctagcccgcct
gcgcacccgccgccgcaccaaccaccgcaccagactctcgcaaggccgaaggactctaga
tacaaaggcaaaagactgtacccatcagtgcctaaccaaccttcagaagcgtcagcacac
ttcatgttcgagctggccaaatcagtgctcttcaaagccggtgggtcctcatccaccagc
ctcttcacgcagacatcctgtgccagagaacatcacgggccacaccgaggtttacacatg
gcggcgtttcaactcgggctgtatgctttgggacttcacaactgcgtgagcgccaactgg
ctgagccgtacctattcttcgcacgtcagttggatcacaggtcaagccatggatatcggt
gcgcctgcaattttgttcttgattgacgcttgggaaggacatttgacgccaccagaagct
gcgggtattgctgataaggcatcgtcaggccgagacgtgcacacagttcgcgccgcggcc
gagctagctctatctgtgttaccgcacgcacacgctctcaactacaacgagattcaacgc
gccgtcttacagtgtaaagaacaaagtgacgctatgctggaacgagcgtgtttgaccgtc
gaggcggccgctaaaggcggcggagtgtaccccgaagtcctgtacacggtggcgcgctac
tggcacgagctgtacctgcggcaagccaacgaggacacggagccgctactcgaggagccg
cagtaccgcgccgcgccgcccgtgcacctgcccgtgccctacccgctgccctaccccttc
acctaccacccctacccgcccatctaccagctgcagtacggcggcgcgccacccccacac
gcggtgagcgggcagtacgcgctgccgccgtacttcgtgcgcggcctcgtgccgcacgcg
ccgctggccccgctgcccgcgcaccccgcgcacccgccgcaccagcagatgccgcagcac
cagctgcagcacccaccgccgctgcccgtcaacgtcaaccacggcgcacccatcccccct
ccgctacccgcgatagccggcgtagcgggcgtagcgagcgtcgggcccgtagccggccac
ggcggcgtcggcgtagcggcgccgctacccgcgcccgtagcacctcctttaccacaggcg
cagctacggcgattactagctgcctatcgcgtaggcatgctggcgttagagacgcaagct
aggagggtccatgatgatcggccgcagaacaagtttggcagaaacccaccgtacggcgag
cacgtgaaatggctcctccgcatctcgaagcggctcggcgcgcagtacctgcaccagttc
tgcgtgtgcgcggtgaactcggtggtgtcgccgttcgtgctgtacgagctgtgcgtggag
tcggcgcactggctggcgcgcggcgggccgcaccacctgctcatgcagcacctgcgcggc
acgctcgcgccgctcgtgcagaagtgtcagcagatgtacatccagtgcatacaccagaag
ctgtaccacctgacgccagtagagtacgaggagtttgtcagcatcgtgctgtcggcgcgc
accgccttccaactaacgccggagggcaacacgcagttcaaagagtggctcgcctcgctc
agaaggtccaaatcgtgcaagaaggacctgtggacccaactgaacgccgcgctccagacg
aacggcaaatga
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