Leguminivora glycinivorella (soybean pod borer): 125225356
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Entry
125225356 CDS
T09956
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125225356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125225356
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125225356
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
125225356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125225356
NCBI-ProteinID:
XP_047984985
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All DBs
Position
4:19297289..19309252
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AA seq
307 aa
AA seq
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MTNLLLSPSEKVFILHGVQDDYRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV
GVKTEIDVPKPDKPDLGKIEFFVDCSANATPEFEGRGGEQLANSIANLMQRAYHSSQAFD
LKQLSILEGKQCWKLYIDVLILESGGNLCDAVSLAVKAALFNTRIPLVKAALMDGGNVDL
QLSDDPYDSKLLDVGTAPLLVTLCKIGDKCVVDPSAEEESCSVISLVVGVTGNPRYYTTE
TLEAPEGGKCTTIAMNGPGSVAPKTLKDAINQGIIAAKSLDEALGEALLRERKETIGLKK
HSYGFLK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgactaacttattattaagtccttcggaaaaagtatttatccttcacggagtacaagat
gattatcgttcagatgggcgatcaaacatagattacaggcctatggagttagaaaccgac
gtagtcagccatgctagtggatctgccaggctacgtttagccaatacagatatacttgtt
ggtgtaaaaaccgaaattgatgtaccaaaacctgacaagcctgatttgggaaagatagaa
ttctttgtagattgttcagcaaatgcaactccagaatttgaaggccgaggaggcgagcag
ctggctaacagcatagcaaacctgatgcagcgagcctaccactcctcacaagcatttgat
ctcaaacaactgtccattttggagggaaagcagtgttggaaactgtacattgatgttttg
atacttgaaagtggtggtaacctatgtgacgctgtgtccctagctgtcaaagcagcactg
ttcaacacaaggattcctttagtaaaggcagcgttgatggacggaggaaatgtagatctg
cagctctctgatgatccctatgatagtaaacttttggatgttggcactgcaccactattg
gtaaccttgtgcaaaatcggcgacaaatgcgtcgtagacccatcagctgaagaagagagt
tgcagcgtcatctccctcgtagtaggagtgacaggcaacccgagatattacactacagaa
actctggaggctccggaaggcggcaagtgcacgactatagccatgaatgggccgggcagc
gtggcgccgaagacgctcaaggatgctatcaaccagggaataattgctgccaaatccctt
gatgaagctttaggcgaggccctactacgagaaagaaaggaaactatcggcctgaaaaaa
cattcctacgggtttcttaaataa
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