Leguminivora glycinivorella (soybean pod borer): 125225385
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Entry
125225385 CDS
T09956
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03013
Nucleocytoplasmic transport
lgly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125225385
03015 mRNA surveillance pathway
125225385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125225385
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125225385
mRNA cycle factors
P-body specific factors
125225385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
125225385
NCBI-ProteinID:
XP_047985040
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All DBs
Position
4:11614400..11620417
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AA seq
500 aa
AA seq
DB search
MTEDQHVKDAQAETGSKTFINKSKDKKTRSQRPLTKIILRRLPPTMTEEQFLEQVSPIPE
HDHFYFAKPDPSLGNNVYSRAYINFVNVEDIYLFRDKFDEYVFVDDRGMEYVGIVEYAPF
QRIPKKKKKKDPKCGTIESDPVYQEFLESLTKEPEVENQPKLEYSYPITDGNDKKVQSTP
LLEYLAARKQDKRGRDERRRRENDKRKMRIERKTKEPAIKEDDSGENEIKKIKPREWEKD
KSSKPREDQGKHDKEGTVFESKTFREQRKSGMGLADKKKRHDSDKKDDDDDESDKSKVDK
PNKSKDAVKEQKSKKYSDTRKERSKPTETIKIDKHSVTGKSSLSEGKYRSLNHDDIKPFT
QLPQVKTDDLTRIIDGMEKKTKLEEAKPRKDSEEATDECSKTNEESIAAAKIRRSSLDSG
EGLNNDESSLKRQNSLDDRGKSTDREGSEEKEKSESTDRRTERRIRNKDRPSRVIYQPGM
GKFSKQRLAKEKETQPSEQK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggatcaacatgttaaggatgcgcaggctgagacgggcagcaaaacatttatt
aataaatctaaggacaagaaaaccagatctcaacggcccctaaccaaaattatccttcga
agattgcctccaacgatgactgaagaacagtttctggaacaagtgtctcccataccggaa
cacgaccatttctactttgccaagccagatccgtcgttgggaaataatgtttactccaga
gcttatataaacttcgttaatgttgaagatatttatctgtttagagataaattcgatgaa
tatgtctttgttgatgatagaggtatggagtatgtcggcatagtggagtatgctccattc
cagagaatcccgaagaaaaagaagaagaaggatcctaaatgtggtaccatagagagtgac
ccggtgtaccaagagtttctggagagcttgaccaaggagccggaggtggaaaaccagcca
aaactagaatactcatatcctattactgatggcaatgataagaaagtccaatcaaccccg
ttgctggagtacctggcagcgcgcaagcaggacaagcgcggtcgcgacgagcgccgccgc
cgcgaaaacgacaaacgcaagatgaggattgagaggaaaaccaaggagcctgccatcaag
gaagatgactctggagaaaatgaaattaagaagatcaaacctagagaatgggaaaaagac
aaatcgtctaagcctagagaagaccaagggaaacacgataaagagggaactgtctttgaa
tctaaaacgtttagggaacaacgtaaatctggaatgggtcttgcagacaagaaaaaaaga
cacgattccgacaaaaaagatgatgatgacgatgaatcagataagagcaaagttgacaaa
cctaacaagtcaaaagatgctgtcaaagaacagaagagtaaaaaatatagtgacactcgt
aaggaaaggtctaagccaactgaaactatcaagatagataaacattcagttaccggaaag
agttctctctcagagggtaaatatagatcattgaatcatgatgatataaaaccattcaca
cagttgccacaagtcaaaactgatgatttgaccaggataatagatggaatggagaagaaa
acgaaattggaagaggcaaaacctcgaaaagattcagaagaagctactgacgaatgtagt
aagactaatgaggaatctatagctgcagcaaagatcaggagaagcagcttggattctggt
gaaggactaaataatgatgagtcttcattgaagcgacagaactcgttggacgacaggggc
aaatctacagacagagaggggtctgaagaaaaggaaaaaagcgaaagtaccgaccggcgc
accgagagacgtattagaaataaggatcgcccaagccgcgtcatttatcagcccggcatg
ggtaaattcagcaaacaaaggctggcaaaggaaaaggaaacccagccatcggagcaaaag
taa
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