Leguminivora glycinivorella (soybean pod borer): 125226170
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Entry
125226170 CDS
T09956
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125226170
03041 Spliceosome [BR:
lgly03041
]
125226170
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125226170
Spliceosome [BR:
lgly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125226170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125226170
NCBI-ProteinID:
XP_047986035
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Position
5:complement(14749609..15431119)
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AA seq
600 aa
AA seq
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MMSCPLPLPLLPALHPQPALASDFPIHIGIKVSESSLLECSNGRYIASETVLLETADAAM
LVERGSDELLSQSGVTVMAPAAPHHADNNNQDSAAKKVKLEQNVGKPSRVIHIRNIPNET
TEAEIIQLGLPFGRVTNVLVLKGKNQAFLEMAEEISAVAMVAYFGGCVAQLRGRAVYVQF
SNHKELKTDQTHSNASASAQAALQAAQVISNSAGAALVAGAGAALQPANGGTEIQGGPNT
VLRVIIEHMLYPIVLDVLYSIFQRYGKVLKIVTFTKNNSFQALIQYPDTVSAQTAKTALD
GQNIYNGCCTLRIDYSKMTCLNVKYNNDKSRDYTNPTLPSGDGDAHQLLTSGGVLAPPFL
GLGSGLASPYGVGVGGVGLPAFGALTLTPASPALRALAAPPLPLATVLLVSNLNEEMVTP
DALFTLFGVYGDVQRVKILYNKKDSALIQMAEPHQAHLALTHMDKLRVFGKAMRVMLSKH
QTVQLPKEGQPDAGLTRDYSQSPLHRFKKPGSKNYQNIYPPSATLHLSNIPATVSEEDIK
EAFTKRGFTIKAFKFFPKDRKMALVQLPSIDDAVAALIKMHNYQLSESNHLRVSFSKSSI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctgccctctcccgctgccgctactgccggccctgcatccccagcctgcgctc
gcctcagacttccctatccacattggaataaaggtgagtgaatcttcactacttgagtgc
agcaacgggcgctacattgcgtccgaaacggtactacttgaaactgctgatgccgctatg
ttagtcgagagaggctccgacgagcttctgtcgcagagtggcgtcaccgtcatggcgccc
gccgctccgcaccacgccgacaacaacaaccaagactctgccgccaaaaaggtgaaactg
gaacagaatgtgggcaagccatcgcgcgtcatccacatacgaaacatacccaacgagacg
acagaggccgagatcatacagcttggcctgcccttcggccgagtcaccaacgtgctcgtc
cttaaaggaaagaatcaggccttcctcgagatggcggaggaaatatccgcggtggcgatg
gtggcgtacttcggcgggtgcgtggcgcagctgcgtgggcgcgccgtctacgtgcaattc
tccaaccacaaggagctcaagacggaccagacgcacagtaacgcctcggcgtcggcgcaa
gcagcgctacaggccgcgcaagtgatctccaacagcgcgggggcggcgctcgtggccggc
gcaggcgccgcgctgcagcccgccaacggcggcactgaaatacagggtggccccaacaca
gttttgcgagttatcatagaacacatgctctaccccatagtgctcgacgtgttatactcc
atcttccagcgatacggaaaggtgctcaaaattgtcaccttcaccaaaaacaattcattc
caagccctcatccaatacccagacaccgtatcagcgcaaacagcaaaaacggccctagac
ggacaaaacatttacaatggatgctgcactctccgcatcgactattcaaagatgacctgc
cttaatgtgaaatacaacaatgataagtcccgggactacaccaatccgacgttgccgtcc
ggcgacggcgacgcccaccagctgttgaccagtggtggcgtacttgctccgccgttcctc
ggccttggctccggtctggcgtcgccgtacggcgtcggcgtcggcggcgtggggctgccg
gcgttcggcgcgctcacgttgacgcccgcatcccctgcgctgcgcgccctagccgcgccg
ccactacctcttgccactgtgctactcgtatccaatctcaacgaagagatggtcacgcct
gacgctctctttacccttttcggcgtgtacggcgatgtgcagcgagtgaagatactctac
aataagaaggattctgctctcattcaaatggctgagccacatcaggctcatctagccctg
actcatatggacaagctgcgcgtattcgggaaggccatgcgcgtgatgctgagtaagcac
caaactgtacagctgccgaaggaaggacaaccggacgctggtctcacgagggactattcg
cagagccccctccacagatttaaaaaacctggcagcaaaaactaccagaacatttacccg
ccaagcgccacgctgcatctatccaacattcccgccacagtctccgaggaagatatcaaa
gaagctttcacaaaacgaggcttcacaatcaaggcgttcaagtttttccctaaggaccgc
aaaatggcgctggtgcagctgccgtccatcgacgacgcggtggccgcgctcatcaagatg
cacaactaccagctgtccgagtccaaccatctccgggtctccttctcaaagtccagcatt
taa
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