Leguminivora glycinivorella (soybean pod borer): 125227086
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Entry
125227086 CDS
T09956
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03020
RNA polymerase
lgly03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125227086
09124 Replication and repair
03420 Nucleotide excision repair
125227086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgly03021
]
125227086
03400 DNA repair and recombination proteins [BR:
lgly03400
]
125227086
Enzymes [BR:
lgly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125227086
Transcription machinery [BR:
lgly03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125227086
DNA repair and recombination proteins [BR:
lgly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125227086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
125227086
NCBI-ProteinID:
XP_047987235
LinkDB
All DBs
Position
6:18080899..18084684
Genome browser
AA seq
1173 aa
AA seq
DB search
MYDTEDDQYEEEDVEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPPIELQAEAQHASGEIEVPPKYLLKFDQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKENEDPIETQHQKTFIGKIPIMLRSTYCLLSNLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRIIAIVPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQGVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGALLLKKKHIDSLKERDYNNYGWQNLVASG
VVEYIDTLEEETVMIAMSPDDLAQIKEYAYCSTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDEDGIIAPGIRVSGDDVVIGKTITLPENDDELEGTTKRYTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNLCGLIAIANLRNNTFECKG
CKNKTQISQIRLPYAAKLLFQELMSMNIAPRLF
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacacagaagatgaccagtatgaggaagaagacgttgaagaaatttcatccgaa
ctctggcaggaagcctgctggattgttatcaacgcatactttgatgaaaaaggtttggta
cgacaacaattggatagttttgatgagtttattcaaatgtcagtgcagcgcatcgtcgag
gattcgccgccaatagaattacaagctgaagcacaacatgcatctggagaaatagaggta
ccaccaaaataccttttgaaatttgaccaaatttacctctctaaaccaactcattgggaa
aaagacggtgctccatcgcctatgatgccaaatgaagctcgacttcgtaatctgacctac
tctgctccattatatgttgacataactaaaaccattgtaaaggaaaatgaggatccaatc
gagacgcaacatcagaagacattcattggtaaaattccaattatgctcagatctacatat
tgcttgcttagcaatctaactgacagagatttgactgagttgaatgagtgccctcttgac
ccgggtggctattttattattaacggttctgagaaggtattgatagcccaggagaaaatg
gcaaccaatactgtgtatgtgttcagcatgaaagatggaaaatatgcctacaaaactgaa
ataaggtcatgcttggagcacagttcccgacccacttccactctttgggttaacatgatg
gctcgaggtggtcaaagcataaaaaaatctgctattggtcagaggattattgccattgtg
ccttacatcaaacaggaaatcccaatcatgattgtctttagggctcttggatttgtggca
gacagagatatccttgaacatattatctacgactttgatgatcctgaaatgatggagatg
gtcaagccatcacttgatgaagcttttgtaatccaagagcagggtgttgctctcaatttt
attggatccagaggtgctcgacctggtgttactaaagaaaagcgtatcaaatatgccaga
gaaatcttacaaaaagaaatgttgccacatgttggagtgtctgatttttgtgaaacaaaa
aaagcatattttctgggttacatggtccacagactattgttagcggctcttggacgaaga
gaattagatgacagagatcattatggaaataagagattagacttggctgggccactgctg
gctttcttattcagaggtctatttaaaaacttattgaaggaagttcgcatgtatgctcaa
aaattcattgacaggggaaaagatttcaatctggaactagccatcaaaaccaaaataatt
acagatggtcttagatactcacttgccacaggcaactggggagaccagaagaaagctcat
caagctagagctggagtatctcaggtgttaaacagattgacctttgcttcaacattatca
catttgcggcgcgtgaactcaccaatcggacgtgacggcaagttggcgaaacctcgtcaa
ttgcataatacactgtggggaatgatatgtcctgctgaaactccagaaggagctgctgta
ggccttgtaaagaacttggccttgatggcttacatttctgtaggaagtcaaccttctccc
attctagagttcttggaagaatggtctatggaaaatttggaagaaattgctccatcagcc
atagccgatgcaacaaagatatttgtaaatgggtgctgggtaggtattcaccgtgaccct
gaacagctgatggctacattgcgtaagcttcgacgccaaatggacatcattgtttctgaa
gtaagcatgattcgcgatattagagacagagaaatacgtatctacactgatgctggcaga
atttgccgtccattattgattgtcgaaaatggagcattattattgaagaaaaagcacatt
gacagtcttaaagaaagggactacaataactatggatggcagaatttggtagctagtggt
gttgttgaatacattgacactttggaagaggaaactgtaatgatagctatgagccctgat
gacttggcacaaataaaagagtatgcctattgttctacatacacccattgcgagattcat
cctgctatgatattgggagtgtgtgcttcaattattccattccctgatcacaaccaaagt
cccagaaacacatatcaaagtgctatgggtaaacaagctatgggagtttacatcaccaac
ttccatgtccggatggatactcttgcccatgtgctgtattatcctcataaaccactggtt
actacaaggtctatggagtacttgagattcagagaactgccagctggcatcaattccata
gtagctattttatgctacactggttacaatcaggaagacagtgtcatcttaaatgcatct
gctgtggaaagaggcttcttccgatcagtgttctaccgctcctacaaagactctgaatcg
aaacgtattggcgatcaagaagagcaatttgaaaaaccaactagacagacctgtcagggc
atgaggaatgcattgtatgataaattagacgaggatggaatcattgcccctggtattcgt
gtctctggcgatgacgtggtaataggtaaaacaataactctacctgaaaatgatgatgaa
ctcgaaggaacaacaaaacgctatacaaagcgtgacgcatccacattcttacgtaatagt
gagactggtatcgtggatcaagtcatgttgactttaaatagcgaaggctacaagttctgc
aaaattcgcgtgaggtcggtccgaatcccacaaatcggagacaaatttgcttcacgtcac
ggtcaaaagggtacttgcggtattcaataccgacaagaggacatgccctttacctgcgaa
ggcttgacccccgacatcattattaaccctcacgctatcccctctcgtatgacaattggt
cacttgatcgagtgtattcaaggaaaggtctcgtcaaacaaaggcgaaattggtgatgct
acaccgtttaatgacgctgttaacgtgcagaaaatctcatcccttctgcaagaatatggc
tatcatctgcgaggtaacgaagtcatgtacaatggccatacagggagaaaaataaatgcc
caagttttcttagggcccacttactatcaacgtctcaagcatatggtagacgacaagatt
cactctagagcgagaggacccgtgcagattttggtacgacagcccatggagggcagagcc
agggatggtggactgcgtttcggagaaatggaacgtgattgtcaaattgctcacggtgcg
gcgcaattcttgcgtgaacgtcttttcgaggtttccgatccctatcgtattcacgtctgc
aacttgtgtggtttgattgccattgccaatctacgtaacaatacgtttgaatgcaaagga
tgcaagaacaagacgcaaatatcgcagattcgtctgccatacgctgctaagttgctgttc
caagaactcatgtcaatgaacattgcccctaggttattttag
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integrated database retrieval system
