Leguminivora glycinivorella (soybean pod borer): 125227116
Help
Entry
125227116 CDS
T09956
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03013
Nucleocytoplasmic transport
lgly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125227116
03015 mRNA surveillance pathway
125227116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125227116
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125227116
mRNA cycle factors
P-body specific factors
125227116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
HA
ATP13
Motif
Other DBs
NCBI-GeneID:
125227116
NCBI-ProteinID:
XP_047987285
LinkDB
All DBs
Position
6:complement(19082170..19091786)
Genome browser
AA seq
1113 aa
AA seq
DB search
MTTMSAPENESGTNCAADETAENTEENDKLALAEYISGLEARIKQKTEMRNSNLNCVRPP
DNHFSKLDSGLKKNTTFVKKLKSFSAIQMDALLKDFSVLNLTKYISEVAAAIAEAKLKMS
DIPAAINLCSALHRTYSEFSSNFFENWQKLLKVTDKITNSSKLRVDIRFYAELVAVGVFP
NKIGLPLLGNVLTVLINMDKEEPNNIPILLSFCKHCGEDYAGLVPKKIKDTAEKLNVQIP
RNTFLPAEKQAVVRQLLKDYFATLLKHLMEERTQLQALHAANQRTLHTRGELSQERKDQL
EHHQATYDKLLAGAQSFAEVLGEELGEAGEPPTLSMTVIETPGTVTIGGTEEFNMQAGTD
PWQDEDTRTFYTHLPDLKVFMPNYQLKETTKSKTETVTEEMLDEDLKEDELSDSEEPAVP
DVEDDHQPTSVSNKYALDAFLNELPNCINRELIDNAAVDFVLNLNTKNNRKKLTRVLFSV
ARTRLDLLPFYSRFAANLYPVLPDVCIDLCQMLKQDFKYHVRKKDQINIESKIKVVRFIG
ELVKFGLYSKMEALYCLKVLLHDFKHHHIEMACNLLETCGRYLYCNPDTHQRTMIYLQQM
MRKKTVSALDSRYVTQIENAFYYVCPPEAPAQPKEEEPPMHQFIRKILHEDLQKSNEEKI
FRLMRKINWEDPEIAAVAIQHLAGGWRVRASARRALARMAAELAAWQEMVAPCVVDTVLE
DIRATLEDPHPRHNQRRIATVRYLGELYNYKLLDSRDVFTVLYSFITFGVTNDHALPSPL
DPPDNVFRIRLVCALLETCGAYFNSGSSKKRLDYFLIFFQHYYWFKCSDPVWTEEYKFPI
YVKYIYQECLMTLRPKLTLFTDWQQCKDAIEELRQTLYPELGEEEYDNEDQGDDSVNDGL
DTIIETDDETDNPQLMDESSDDEPLTENAGAEENEVHSDDNNMSNEPRRPAPKPVEDVEF
ESAFEKMVMENIAERQRENRPQQRDIAVPMTCRQTTKKTYDQLLVGSQGEEGVEFVLMVR
KGTKPQYKSFNAPPELASNLQQQALADKQEKERVKRLTLNISERQEEEEYSAESGGGSGG
LGNPNRGQHVRQKYQHPKGAPDADLIFGPKKFK
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgactacaatgagtgcaccagaaaatgaatccggaacgaactgtgcagctgatgagacg
gctgaaaatacggaagaaaatgacaaactggcgcttgccgagtatatttctggcctggaa
gcgagaataaaacagaaaactgaaatgagaaatagtaatttgaattgcgttcgacctcca
gacaaccacttttcaaaattagattcgggcttaaaaaagaacaccacttttgtaaaaaaa
ttaaagtctttcagtgctattcaaatggacgcgttactgaaagatttcagtgtactgaat
cttaccaaatacatatctgaggtagcagctgccatagcggaagcaaagttaaagatgtca
gacataccagcagcaataaacttgtgttcagcgcttcaccgcacatactcagaattctct
tcgaatttctttgaaaattggcaaaaactacttaaagtgacagataaaataacaaattct
tctaaattgcgtgtggatatcagattttatgcagagttagtagcagtgggtgtgttccct
aataaaataggtttgcctcttctgggcaatgtcctgactgttctgatcaacatggacaag
gaggagcccaacaatatcccgatactgttgtcattctgtaagcactgtggggaggattat
gcagggttagtacccaagaaaatcaaggatactgcagagaaacttaatgtgcaaattcca
cgaaacacattcctgccagccgagaagcaggcagttgttcgccagctactcaaggactac
tttgccacattactgaagcacttgatggaggagcggacgcagctccaggcactccacgca
gccaatcagaggacactgcacacgcgcggggagctctcgcaggagcgcaaggaccagctg
gaacatcaccaggcaacctacgacaaattgctagctggcgcgcaaagtttcgccgaggta
ctgggcgaggagctgggtgaagccggtgaacccccgacactgtccatgactgtaatagaa
acgcccggcacagttaccatcggcggcactgaggagttcaacatgcaggctgggactgac
ccctggcaggatgaggacacgaggacgttctacacgcatttgccagatttgaaagtgttt
atgcctaactatcaattaaaggagacaacgaaaagtaagactgaaaccgtgacagaagag
atgctggacgaagacctgaaagaggatgaactgagcgacagtgaggagcccgccgtgccc
gacgtggaggacgaccaccagcccaccagcgtctccaacaaatacgctcttgatgcattt
ttgaacgaactgcccaactgtatcaatcgagaactcattgacaacgccgccgtagacttc
gtcttgaatctcaacaccaaaaacaacaggaagaaactgaccagggtgctcttcagtgtt
gccaggaccagattagatttgttgccattttattcccggtttgctgcaaatctgtatcca
gtgttgcctgatgtgtgcatcgatttatgccaaatgttgaagcaagattttaagtatcat
gttaggaaaaaggatcagatcaatattgagtcaaagattaaagtagtgagattcattggt
gaattagtaaagtttggtctgtactccaaaatggaagccctatactgcctgaaagtgtta
ctgcacgactttaaacatcatcacatagagatggcgtgcaatctgctggaaacgtgcggg
aggtatctctattgcaatccggatactcatcagaggactatgatttatttacagcagatg
atgaggaaaaagactgtttcagccctcgactcgcgctacgtaactcaaatcgagaacgcg
ttctactacgtgtgcccgcccgaagccccggcccaacctaaagaggaagagccacccatg
caccagttcatcagaaaaattctccacgaagatctgcagaagagcaatgaggaaaagatc
ttcagactgatgcggaagattaactgggaggatccggagatagcggcggttgctatacag
catttggcgggcgggtggcgcgtccgcgctagtgcgaggagggcgctcgcacggatggcg
gctgaactagctgcttggcaggagatggtggcgccgtgcgtggtggacacggtgctggag
gacatccgcgccacgctggaggacccgcacccgcgccacaaccagcgccgcatcgccacc
gtgcgctacctcggcgagctctacaactacaagctcctagactcccgcgacgtcttcacc
gtgctctactccttcatcaccttcggcgtcaccaacgaccacgcgctcccctcccccctc
gacccccccgacaacgtcttccggatcagactagtctgcgccctcctagagacctgcggc
gcctacttcaacagcggctccagcaagaaacgcctcgactacttcttgatcttcttccag
cattactactggttcaaatgctccgatcccgtttggactgaggagtacaaattccctatc
tacgtcaagtatatatatcaggagtgtttaatgacgctccgaccgaagttaacccttttc
accgactggcaacaatgtaaagacgcaatagaggagttaaggcaaacgttgtatcctgaa
ttaggcgaggaggaatatgacaatgaggaccagggtgacgatagtgtgaatgacgggttg
gatactataatagagactgatgacgagactgacaaccctcagttgatggacgagagctcg
gacgacgagccgctgacggagaacgctggtgcggaggagaatgaggtccacagtgacgac
aataatatgagcaacgagccgaggagacccgcgcctaagccggttgaagacgtagaattc
gagtcagcattcgagaagatggtgatggaaaacatcgcggagcgtcagcgcgagaaccgg
ccgcagcagcgcgacatcgcggtgcccatgacctgccgccagaccaccaagaagacctac
gaccagctgctggtaggctctcaaggggaggaaggcgtggagttcgtgctgatggtccgg
aaaggcacgaagccgcagtacaagtcgttcaacgcgccgccggagctcgccagcaacctg
cagcagcaggcgttggctgacaagcaggagaaggaaagagtcaaacggttaaccttgaac
atatcagaaaggcaagaagaagaagaatacagcgccgaaagcggcggcgggtccggcggt
ctcggcaacccaaaccgtggccagcacgtccgccagaagtaccaacaccccaagggagct
ccagacgcagacctcatcttcggacctaagaaattcaaatga
DBGET
integrated database retrieval system
