Leguminivora glycinivorella (soybean pod borer): 125227904
Help
Entry
125227904 CDS
T09956
Name
(RefSeq) rotatin-like isoform X1
KO
K16484
rotatin
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lgly03037
]
125227904
Cilium and associated proteins [BR:
lgly03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125227904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
125227904
NCBI-ProteinID:
XP_047988262
LinkDB
All DBs
Position
7:complement(14148840..14217764)
Genome browser
AA seq
2013 aa
AA seq
DB search
MTSTEYLSNYIKKLGHPIREIRERSLQLLAAKLRLGWEIEDELSGTRELLDALLAWFYVQ
KPTLQGEALQLLLGTVMTKAGNYIVKEYGVKSFLSKLDALKHKIDQDACDTYRQLIESIQ
FLNTVEEGNNLDVPRLTIPSVTSSDSDRDSNQDYLTGLRNDYQSSRDGSVSNEDPVNVSK
DHNGIRVLLFPWVLLTSSDSKTVILVEDALKLLKSTRRCCRFICDVFLRDFPPEIFLNRP
SIVQNLLAMADTGQGGRPNEALLVLLSITRALNKRIYELSSVDLVNDAYKITDSKETEDG
MNAELRELAGNISPELQDDTLAALRQWPAPLYALDTTHTVFTIMARSVVLVDAEDKSEVL
DVKTLNTCLSLVESLIQLLLECVSESFWTADHASKTHRDIAHKSCMVMRLLGDLMTKYKK
SYTNYPELIHHRVAWFRLVRCAEKLLHWARRSALPPSSLLVALQTAQLDPALELFYPSLS
EDICEVLQNTKISTSNEFKTKHQELTRLIEAMDASVKFMKNKNSCCNSKNVLKIIKKSLA
AIEIHLNEGYLDEVADILLKKARYMDLSNEDWTLARSIALSLMAHNVNWVAIKFYSQMAD
MVKSVLVDEDINQIDNEKCLTLLCDVSILTEICCHGMSSNIKDIEASAIDIMLYLLRGRM
VLSESCWWRLLASLLPILPLLHVYAAHDTEIGQAICKSLEPEISECMGVCASENTMGLVR
LLFVECVAVRMEAAHQLCRLLGDHRYLPPKESLRTDVLLNALRRIKPQSFNVDYSSSPSK
THQTGLSQILDVLKQDIVLDENGKEYVTRSSVRPILEPSLRRSSLQQLSVLMRQQGAHDA
FLRYDGIQLIVAILRMSLMVDDYLAFPECAISCVSILNSVCFASRHVLAKVHDLPSLLIR
VILVFPANDSAVLMSAQILALIAWSGFALQELDANRCHIPALPHSVVDRTVLPFNVNSYW
SRSPNAEHSIVEWLLSDDDWRASVRIRWWCAWESPSRVLKGASPPPAPLALRPTADDLML
LRSASPVHEATKALLALENATSHKQVNEALNILESYTQLAKWSPECADFGALPWQNMRRF
LCAPPASPRDTALLTALLQFIVAYMDNLPNEAGAHTWVKSCFLGKDTSVIALLSRDRLFP
QQTAQDDIEITQLHIHIIKVLLRCVVLLEAYDDFDSSRLESLVKILLACLEKVDLRNFHM
LGYLNELMRCIRHALYSRYCKLSENTRDSCLALVTRTLSGCCAGSGRKGQACRLDAVLSL
LAMLRQVYEEGIPPQRWSEAWSGDAVRCVVACAGSARGSLRAAALRVIAQLARYSQLLPQ
LLQAIPSDSMAQYAVSIISNEREANAVRAAAAVLLTVVASRPSHYTDILESEILEQLQEY
NFLETCIEIFVEFCNGIKYQNQIEPNVPISLLERRSELEVRAEKCADVRISPSIGGQVRR
APTASLVAALADVLRNVAAFKRCPVQAWNEQGLYRLLFRCASWSRSSPLDNCRVRAASCR
ALVAAAPYKCVRSSLAGTKDCLHNLMTTLTPLDDDEVIVDTLAARSQALLLLGSLLPDRS
TGDSVWTQLRNEPSAPFFSLLLQCLESDVTDFQDAALFCLAQLAQSAANRKHPDKTQDES
CIDLLDSMKALRFDNRDHCAGDADCQPEYLVEELCWALMQIYQNMALQGNVQESAQDERW
CRLCSCLASLLAVSARGRLYSVHRQFPRTLLATLQTVRDRLSMLGQPVEVIRNANTNPTL
RTLYWLLTLISSLMTDCLPAKESLAEDNIALSLNRLWPWCMMTESLREAVVHLLLTFTNN
CPKAWSAMCLCVAGRSLLLECCALVSREAAAACRSRSELALLACVRILRHTVNHHHCRAV
ILKSEALSSLHKMRSRARTGALSRQWSLLCCALARHADGAAAVLALKPRAAPLAAVAHAA
CHAPLRPAFLNDPELLEMLTGSLLTGDIADIVSSARAVWALAANNHKAKLLLRSARVPLA
VNSAQQRLQRSTDPAAARALQLIAYTRSVLQTS
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgacatccactgaatatttatctaattatataaaaaaattgggtcatcctataagggag
atacgtgaacgctcgttgcagttattggccgctaaactgcgtttgggctgggagattgaa
gatgagttgtctggtacgcgtgaactcttggatgctttgctggcatggttctatgttcaa
aaacctacgctccaaggcgaagcactacaattactacttggtacagtaatgacaaaagcg
ggtaattacatagtcaaggagtatggagtcaagagttttctatctaaattagatgccctt
aagcacaaaattgaccaagatgcttgcgacacctacagacaactgatcgaaagtatacag
ttcctcaatacagtggaagaggggaacaatctggatgtgcctcgcttaactataccttct
gtcactagttctgacagtgatagggattcaaaccaggactatttgacaggcttgagaaat
gattaccaatcatccagagatggctccgtatccaatgaagaccctgtcaatgtgtccaaa
gaccataatggcatccgggtacttctttttccatgggtattactgacatcatcagattcc
aaaactgtgatactagtagaagatgcactgaaactgctaaaatctacgcggcgttgctgt
cgcttcatctgtgatgtgttcttaagggatttcccgcctgaaatatttctgaatcgacca
tcaattgttcagaacctgctggcaatggcagacaccgggcagggtggtcgtccaaatgaa
gccttactagttctgctgagtatcacccgagctctgaataagaggatctatgaactatct
tctgttgatttggttaatgatgcatacaagatcacagactcgaaagaaacagaggacggc
atgaacgcagaactgcgggagctagctggcaacatttcccctgagctacaggatgatact
ctggctgctttgagacagtggccagctcccttgtacgctttggatactacacataccgtg
tttactatcatggctagaagcgttgtactggttgatgcggaagataagagcgaagtttta
gatgtgaaaacgctgaacacgtgcctcagcctagtggagtcccttatacagctcctactg
gagtgtgtatcggaaagcttctggaccgctgaccacgcgtctaaaacgcacagggacatc
gcccataaaagctgtatggtcatgagattgcttggtgacttgatgacgaagtacaaaaaa
tcatacacaaactaccccgaactgatccatcatcgagtagcgtggttccgtctagtacgg
tgcgcagagaagttactacactgggcgcgacgttcggccctcccgccttcttcgctacta
gtcgctttgcagactgcacagctcgacccagctctggagttgttctatccgagtctgagc
gaggatatttgcgaagttttacaaaatacgaaaatatcgacgagcaacgagttcaaaaca
aaacaccaagagttaaccaggctcatagaagcaatggacgcttcagtaaaatttatgaaa
aacaaaaactcttgttgcaacagtaagaacgtactgaagatcattaaaaaatctttggca
gcaatagaaatacacttaaacgagggatatttggacgaagtagctgatatactattgaaa
aaggctagatatatggacttgagcaatgaagattggactttagctcgaagtatagcactg
agtctgatggctcataatgtgaattgggtggccataaagttttacagccaaatggctgat
atggtgaagtctgtgttggtggatgaagatataaatcagatcgacaatgagaagtgctta
acgttactttgtgatgttagtatattgacagaaatatgttgtcatggaatgtcgtccaac
ataaaagacattgaagcaagtgcaatagacattatgctgtacttgcttcgcggccgtatg
gttttgagcgaaagttgttggtggcggcttttggccagtctattacccatattaccactg
ctgcatgtctatgcggcgcatgacacggaaatagggcaagcaatatgcaaatctctagaa
ccagaaatttcagaatgtatgggcgtatgcgcatcggagaataccatgggtctcgtgcga
ttactgttcgttgagtgcgtggcagtacggatggaggccgcgcaccaactctgccggctg
ttaggcgaccacaggtatttacctccgaaagagtccctacgcacggatgtgttactaaac
gcgttaagaagaattaaaccgcagagtttcaatgttgattactctagctctccttcaaaa
acacaccagacaggcctctcacaaatcctcgacgtattgaagcaagacatagtactagat
gaaaacggcaaagaatatgtgacacgttcatcagtacggccgattttagaaccttcacta
cgtagaagttctctgcagcaattgtcagtgttaatgcgacagcagggcgctcatgatgcg
ttcttgcgttatgatgggatacagctcattgttgctatactaagaatgtctctgatggtg
gacgactacttggcctttccagagtgtgccataagttgcgtatcaatacttaacagtgtg
tgtttcgctagccggcatgtgttggctaaggtgcacgatctaccctcacttttgattaga
gtgattttggtcttcccagcaaacgattcagcagtgctgatgtcagctcaaatactagcc
ctaatcgcgtggtcaggcttcgcccttcaagagttggatgcgaatcgatgccacataccg
gcgttacctcatagtgttgtggaccggactgtactgccgtttaatgttaacagttattgg
agtaggagtcctaatgctgaacattctattgtagaatggctactctccgacgatgactgg
cgggcttccgttcgcatccgttggtggtgcgcttgggaaagcccctcccgcgtcctaaag
ggcgcctctccaccccccgcacctctagccctgcgtcctacagcggatgatctgatgctt
ttacgctctgcgtccccggtacatgaggcgactaaagcactgttagcgctggagaatgct
acgtcgcataagcaggtcaatgaagcactgaatattttggaaagttacactcagctagct
aagtggtctccggaatgcgcagacttcggcgccctaccctggcagaatatgcgtcggttt
ttatgcgcgccgcctgcctcgccccgcgacactgcacttctgaccgctttactgcaattc
attgttgcttatatggacaacttgcctaatgaagccggcgcacatacctgggtaaaatcc
tgcttccttggcaaagacacgtctgtaatcgccctactcagccgcgacagactcttcccc
caacagactgcgcaagacgacatagaaatcactcaattacacatacacattatcaaagtg
ttgctacgatgcgttgtcttactggaagcctatgatgactttgacagcagcaggctggaa
agtctcgtgaagatactgctcgcgtgtttggagaaggtggatttgaggaattttcatatg
ttgggttatctaaacgagttgatgcgctgcatacgccacgccctctactctcgctactgc
aagctatcggagaacacacgagactcctgcctcgcgctagtaactcgcacactgagcggc
tgctgtgcgggcagcggccgcaaggggcaagcgtgccgacttgatgccgtgttgtctctg
ctagctatgttgagacaggtctatgaagagggcataccgccgcagcgttggagcgaagcc
tggtcgggtgacgcggtgcgctgcgtcgtggcgtgcgcggggagcgcgcgaggctcgtta
cgagccgcggcgttgcgcgttatagcgcagttagcacgatatagccaactcttgccgcag
ttacttcaagcgatcccatcggactccatggcacaatacgccgtgagcataatctcgaac
gagcgtgaagcgaacgccgtgcgcgctgcggccgctgttctgctgacggtcgtggcttcc
cgtccatcgcactatactgatatattggagagtgaaatcttagaacagcttcaagaatat
aactttttggaaacttgcatagaaatatttgtcgagttttgcaatggaataaaataccag
aaccaaatagaacctaacgttccaatatctctactcgagcgtcgttcggaactcgaagta
cgcgccgagaaatgcgccgacgtgcgtatatcgccgtcgatcggcgggcaagtccgtcgc
gcgccgaccgcgtcgctagtggcggcacttgctgatgtattacgcaacgtggcggcgttc
aagcggtgcccggtgcaggcgtggaacgagcagggactgtatcgactgctgtttagatgc
gcttcctggtctcgtagttccccgttggacaactgtcgcgtgcgcgccgcgtcgtgccgc
gcgctggtcgccgccgcgccgtacaaatgcgtgcgctcgtccctggccggtactaaggac
tgtttacacaatctgatgacgacacttacaccgttggacgatgacgaagtgatcgtcgac
acactagcagcacgatctcaagcgttgctactcctcgggtctttgctgccagaccggtcg
actggcgattcagtctggacccagctgcggaacgaaccgtcagcaccgttcttcagtctg
ctactgcagtgcttagagagtgatgtcacagatttccaagatgcggccctattctgtctc
gcccaactcgcacagtctgccgctaaccgcaagcacccagacaagacgcaagacgagtcg
tgcatagatctcttggacagcatgaaggcgcttcgcttcgacaatcgggaccactgcgcg
ggtgacgctgattgccagccggagtatttagtagaggagctgtgttgggcgctgatgcag
atttatcagaatatggctctgcaggggaacgtgcaagagtctgctcaagatgagcgctgg
tgtcgtctctgctcatgcttggcgtccttactggcagtgagcgctcgtgggagactgtac
agcgtacatcgacagttcccgcgtactttactggctactctacagactgtgcgtgacaga
ttgtctatgttagggcagcctgttgaagtgatcaggaatgctaatactaatccaaccctg
cggacattatactggctcctcaccctcatcagtagcttgatgacggactgtttgccagcg
aaggagagtttggcggaagacaacatagctttgtctctaaacagactttggccgtggtgt
atgatgaccgaatcactaagggaagctgtggttcatttgttattgacattcaccaacaac
tgtcctaaagcatggagcgcaatgtgcttgtgcgtcgccggacgcagtttgctactggag
tgttgcgccctcgtgagccgcgaagctgcggctgcttgccgctcgcgctctgagctagcc
ttgttggcctgtgtacgaattttgcgccacaccgtcaaccaccaccactgtcgcgccgtc
atactgaagagcgaggcgctgtcatctctccacaagatgaggtctcgggcgcgcaccggc
gcgctatcccggcagtggagcttgctgtgctgcgcgctggcgcggcacgcagacggtgcg
gcagcggtactggcgttaaagccacgcgcggcaccgctggcggccgtggcacatgcggcg
tgtcacgctcctttgcgacctgcgttcctcaatgacccggaactcctggagatgctgaca
ggcagtctgctgacgggggacatcgctgacatagtgtcgtcagcccgcgctgtgtgggcc
ctggctgctaataaccataaggcgaaactcctcctaaggagcgcgcgagtaccactagca
gtgaactcagcgcagcagcgattgcaaaggagtacggaccccgcggcggcgcgagcgctt
cagctcatcgcttacacgcggtccgtactgcagactagctga
DBGET
integrated database retrieval system
