Leguminivora glycinivorella (soybean pod borer): 125228004
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Entry
125228004 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup154
KO
K14312
nuclear pore complex protein Nup155
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125228004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125228004
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125228004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Utp8_b_propeller
Motif
Other DBs
NCBI-GeneID:
125228004
NCBI-ProteinID:
XP_047988397
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Position
7:10990438..11012088
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AA seq
1360 aa
AA seq
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MPSAVGIVDTSHPANNIKMQLECLELAGCTLDRHINADNSRPSFLEITGIAAQRVPTCSG
LNAGDYRNLAALLNHPNLSQLKTLNKVPLPPEIMEHFAHMQCHCLMGVFPEISRVWLTID
SNIYVWAFEHGTDVAYFDGLGETIVSVGLIKPKPGVFQNFVKYLLVLTTTVEIVVLGVTF
SSSKNEGDNFEEMHLVPEPVFVLPTDGVSMMSVKSTANGRIFMGGKDGCLYEITYQAQLG
WFGKHCQKINHSTSALSFLVPSFLNAALYDEDPIVKIEVDNSRNILYTLSEKGCIEMFDL
GQKGDSLSRVVRLTQGKIVSSAVDIVKTLEPTNFKPVIAISAVDESESEHFNLVAVTQAG
ARLYFTTEGGDAGQGGPARPQYLTLLHVRLPPGFTPNASVLKPKQVHSAVYENGTLLMVC
SAGGGEAETLWCLSRAIPGAGFSEAHTLLALDGPAWALTALPLHQTAHLSPALLTKKDPW
SVSRWAVVTGCGAACVAAGAAPDVLRTLLRDCRGPDAQPVKDFFQLHGVEQACACALFLA
CEETTSGDMSISEWATRAFFLFGGQVAQHPHPQPMFQPNSQMASTIASPKFSPRQMSTPM
NAPKGRPNQFPQSPTGNLNQSYQQNQLNRSYPRSPGQQMMPQYPQSPGFNQSFGANVTQQ
VRDPNYPIQYEFSAKHNGAYIYVGKILSPIWNQKCVSKSQTPDKKEFMSSRVTGEDCAFI
VQKLQRVSAFLQRAVPSQHSDENSSLHALKLFVTMAIEMLSLWKVLCEHQFHVIAASLPP
EQQSALQAASFRELLVGGQEVACLLLGSLVAGYLRDNASVDGISHKLRQLCPTLYRQEDA
TCSKANELLIFAKQQKNPAEREEMLQTALKLCKDVAPNVNLPLVCSKLVSAGFYSGVVDL
CAACACKLDPQDKALHFYRSDQPSQDREGQLIYYRRMEIYREVCNALERLYESSSDNNAN
ETGVLNTSQGHSANDNTLSMSAADANFQGRKLVWDCLSRDDELLHVAVYEWLVSKNLGSE
LLSLGTAPPDSLRTYLNAAARTASPPAALHLLDLLWKVLEKSGDHLGAATVLEGLATRPG
SGATLAARMAWLSAGVVCVRGASAGAGGGELLRRLEEAGEVARVQAHVRAAAAALPRALR
PPPPMLQRLHDQLLDITQLYEEYADRYNLWECKLAIVQCSGHNDDLLVENIWSNILAEAE
AAAXLLPSPDDRLASVLSKLTTLGREYVNTGHCFPLYFIVRQLEILACKLQADQGMVFRT
ILNIGVSIEQVLDIYIKLVSVNERVWLGSGDETHVCGSAARLLEAARRELAPLAAAARRR
ARARCKDLHEAAVSALQARPNTQRLIDRLSAAQAHLDRMD
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtgctgtgggcatagttgatacttcacaccctgccaataatatcaagatgcaa
cttgagtgtttggaattggccgggtgcaccctggaccggcacataaacgccgataattcc
cgcccttcctttttagagattactggaatagcagctcagagagtgccaacatgcagtggt
ctaaatgctggggactacagaaacctggctgctctactcaaccatccaaatttgtcccag
ctgaagacactcaacaaggtcccactaccaccagaaattatggaacactttgcgcatatg
caatgtcattgtttaatgggagtctttccagaaataagcagagtgtggctcaccatagac
agtaacatctatgtgtgggcctttgaacatggcactgatgtcgcctactttgatgggctg
ggagagaccatagtcagtgtgggtctgattaaaccaaaaccaggagtctttcagaacttt
gttaaatatttgctagtactgacaacaactgttgaaattgtagttttaggagtaacattt
tcttcaagtaaaaatgagggtgataattttgaggaaatgcacttggtccctgagccagtg
tttgtcctacctacagacggtgtgtcaatgatgtctgtcaaatctactgctaatggtaga
attttcatgggaggtaaagatggatgtctttatgaaataacttaccaagcacagttagga
tggtttggtaaacactgtcaaaagataaaccattcaaccagcgccctttcattcctggta
ccatctttcttaaatgcagctctgtatgatgaagaccccatagtaaaaattgaagtagac
aattctcgtaacattttgtacacattgagtgaaaagggatgcatagaaatgttcgacttg
ggacaaaaaggagacagtcttagcagagtggtcagactgacacaaggaaagattgtatct
tctgctgttgatatagtaaaaactctagaaccaacaaatttcaagccggtgatagcaatc
tcagcagtggatgagtctgaatctgaacatttcaatttggtggctgtcactcaagctggg
gcccggttgtacttcaccaccgaaggaggagatgccgggcaaggaggccccgcgaggccg
cagtatctgacgctgctgcacgtgcgcctgcccccgggcttcacgcccaacgcgtccgtg
ctcaagcccaaacaagtccacagcgccgtctatgaaaatggaactctgctcatggtatgc
tccgccggcggcggcgaggcggagaccctctggtgcctgtcgcgagctatccccggggct
gggttcagcgaggctcacacgctactcgcgctcgatgggcccgcctgggcgctaactgcg
ctgcctttgcaccagaccgcacatctatccccagctttattgacgaaaaaagacccctgg
agcgtgtcccgctgggccgtggtgacggggtgcggcgcggcgtgcgtggcggcgggcgcg
gcgccggacgtgctgcgcacgctgctgcgcgactgccgcgggcccgacgcgcagcccgtc
aaggacttcttccagttgcacggcgtggagcaagcgtgcgcgtgcgcgttgttcctggcg
tgcgaggagacgaccagcggcgacatgtccatcagcgagtgggcgacgcgcgccttcttc
ctgttcggcgggcaggtggcccagcacccgcacccgcagcccatgttccagcccaactcg
caaatggcgtccactatagcttcaccgaagttttcgccacgtcaaatgtcaactcccatg
aacgccccaaaaggccgaccgaaccagtttccacagagcccgaccggcaacctgaatcag
tcctatcaacagaaccaactgaaccggtcctacccacggtccccaggccagcagatgatg
ccacagtaccctcagagtccaggcttcaaccagagctttggggctaacgtgacccagcaa
gttagggacccaaactaccccatccagtatgagttcagcgccaaacacaatggagcgtat
atttatgttggcaagattctgtccccgatttggaaccagaaatgcgtttcaaaatcgcaa
acgcctgataagaaggaatttatgtccagccgagtgacgggagaggactgcgcgttcata
gtgcagaaactgcagcgagtgtccgccttcctgcaacgcgctgtgccttcgcaacattcc
gacgaaaactcctccttgcatgccttgaaactgtttgtcactatggcgatagagatgctt
agcctgtggaaggtgctttgtgaacaccagttccacgttattgcggcgagtttacctccg
gaacagcagagcgcgctacaggctgccagcttcagggaactgttggtcggtggacaagaa
gtcgcgtgtctcctgcttggttctctggtggccgggtacctgcgtgacaacgcgtccgtg
gacgggatctcccacaaactgaggcagctgtgccctacgctgtacaggcaggaagatgct
acttgttccaaggctaacgaattattaatattcgccaagcaacagaagaaccccgcagaa
agagaagaaatgctgcaaactgcattgaagctctgtaaagatgtagcccccaacgtgaac
ctgccgctagtgtgctctaaactggtgtcggccggcttctactcgggcgtagtagacctg
tgcgcggcatgcgcctgcaagctggacccacaggacaaggcgctgcacttctacaggagt
gatcagcccagccaggaccgggagggacagctcatatactacaggagaatggaaatatac
cgcgaagtgtgcaatgccttagagagactgtacgaaagcagttccgacaacaacgccaac
gaaactggcgtgctgaacacttctcaaggtcactccgctaatgacaacacactcagcatg
tcggctgctgacgccaactttcagggaaggaaactggtttgggactgtctttcacgcgat
gatgagctactacatgtggctgtatatgaatggctagtcagtaaaaacttaggatcagaa
ttattatcactgggtaccgctccgccggactccctccgcacatacctgaacgcggccgcg
cggacggcctcaccgcccgcggcgttacatctactagatctgctctggaaggttctggag
aagagtggcgaccatctcggcgccgctaccgtgctagaggggctcgccactagacctggg
tcgggcgcgacgctggcggcgcgcatggcgtggctgtcggcgggcgtggtgtgcgtgcgc
ggcgcgagcgcgggcgcgggcggcggggagctgctgcggcggctggaggaggcgggcgag
gtggcgcgcgtgcaggcgcacgtgcgcgccgccgccgccgcgctgccgcgcgcgctgcgg
ccgccgccgcccatgctgcagcgcctgcacgaccagctgctcgacatcacgcagttatac
gaagaatacgccgaccgttacaacctctgggagtgcaagctggccatcgtgcagtgctcg
ggccacaacgacgacctgctggtggagaacatctggagcaacatcctcgcggaagccgag
gcggccgcgncgctccttccttcacctgacgacagactggcgtctgtgctcagcaaactc
actactctggggcgggagtacgttaacacgggacactgcttccctctatattttatcgtc
cgtcagttagaaatattggcatgcaaactacaagcagaccaaggcatggtgtttagaaca
atattgaatattggagtttcaattgagcaagttttggatatttatattaagttggtgagc
gtgaacgagcgcgtgtggctgggcagcggcgacgagacgcacgtgtgcgggtccgcggcg
cgcctgctggaggcggcgcgccgggagctggcgccgctggccgccgccgcgcgccgccgc
gcgcgcgcgcgctgcaaggacctgcacgaggccgccgtctccgccttgcaggcgcgaccg
aacacgcagcgactaatcgatcggctgtccgcggcgcaggcgcacctggaccgaatggat
tga
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