Leguminivora glycinivorella (soybean pod borer): 125228273
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Entry
125228273 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03030
DNA replication
lgly03410
Base excision repair
lgly03420
Nucleotide excision repair
lgly03430
Mismatch repair
lgly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125228273
03410 Base excision repair
125228273
03420 Nucleotide excision repair
125228273
03430 Mismatch repair
125228273
03440 Homologous recombination
125228273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgly03032
]
125228273
03400 DNA repair and recombination proteins [BR:
lgly03400
]
125228273
Enzymes [BR:
lgly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125228273
DNA replication proteins [BR:
lgly03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
125228273
DNA repair and recombination proteins [BR:
lgly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
125228273
MMR (mismatch excision repair)
DNA polymerase delta complex
125228273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
125228273
NCBI-ProteinID:
XP_047988728
LinkDB
All DBs
Position
7:complement(8708606..8712190)
Genome browser
AA seq
1087 aa
AA seq
DB search
MDKRKAFSNSKPPLKRFKSNDDDDDNEPPCSFEDQLAGMDSHDFDSPEVIGDGPENQSTN
IKWSRPPPPAMDPKNDKLVFQQLDIDHYIGQPIAGMPGSQLGPVPIMRMYGITMEGNSVC
CHLHGFTPYFYVTVPLNFTESSCHDMKVNLNKALLEDLRSNKDNIKEAVLEIRLIKARSI
MHYKGDIDITFARVSVALPKLIAASKRLIDRTPPTFGLMDPHFYETNIDFDIRFMVDTSV
VGCSWIELPTDKWTIRTQYTKLKPESRCQIEVDIAWNAFIAHQPEGEWSKVAPFRILSFD
IECAGRKGVFPEPNHDPVIQIASMVIRQGELEPYLRNVFTLNTCAPIVGSQVLSFQSEAE
MLARWSDFFRELDPDIITGYNISNFDWPYLINRAKHLKVENFDFLGRIKNVRSVIKDSIL
QSKQMGRRENKSVNFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIISD
LQNENEQTRRRLAMYCLKDAYLPLKLLNKLMCIINHMEMARVTGVPLLCLLTRGQQIKVV
SQLLRKAKDAGYLMPAYHGQGSDDQFEGATVIEPKKGYYADPISTLDFASLYPSIMMAHN
LCYTTLVPPNVLKDLNLSADDITTTPSKNMFVKANVRKGLLPEILESLLAARKKAKADLK
NEKDPFKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEFTKSEV
EKKYTKANGYKEDAVVIYGDTDSVMVKFGVKTLEESMQLGSEAAEFVTAQFVKPIKLEFE
KVYYPYLLINKKRYAGLYFTRTDKYDKMDCKGIETVRRDNCPLVSNMMSTCLQKLLIDRD
PDGAVNYAKQIIADLLCNRIDISQLVITKELTKNDYAAKQAHVELANKMKKRDPGTAPKL
GDRVPYVLCCAAKNTPAYMKAEDPIYVLENSVPIDFNYYLENQLSKPLLRIFEPILGEKA
ESLLLKGEHTRTKAMVTSKVGALAAFTKKRXKCIGCKTVMPNDSKSALCSHCTPKEGQLY
ITEIFKLRQLQDKFSRLWTECQRCQGSLHEEVLCTNRDCTIFYMRKKVGMELDAQEKNVS
RFGVPSW
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaggaaagcgtttagtaatagtaagccaccattaaagaggtttaaatctaat
gacgacgacgacgacaatgagcctccttgtagcttcgaggatcaactggcaggtatggac
agccatgactttgactcgccagaagtcattggtgacggaccagaaaatcagtctacgaat
attaagtggtctcgaccacctccgcctgccatggatccgaaaaatgataagttggtcttt
cagcagttagacatagaccactacataggacaacctattgcaggcatgcctgggtctcaa
ttgggcccagtaccgatcatgagaatgtatggtataaccatggaaggtaactcggtatgt
tgtcatctacatggatttacaccttacttttatgtaacagtgcctctgaattttacggaa
tcatcatgtcatgatatgaaagtcaatctgaataaagctctcttagaagatttacgatca
aataaagataatattaaggaagcagttcttgagatacgcttgattaaagccaggtcgatc
atgcactacaaaggagatattgacataacttttgcaagagtttctgttgcattacctaaa
ctcattgctgcttctaaaaggctaatagacaggacacccccaacctttggcttgatggac
cctcatttttatgaaaccaatattgatttcgatattcgcttcatggtggatacttcagta
gtgggctgtagctggattgaacttcctactgataagtggacaatcagaacacaatacaca
aaattaaaaccagagtctagatgtcaaattgaagttgatattgcatggaatgccttcatt
gcacaccaacctgaaggagaatggtctaaagtagctccatttagaatactgagttttgat
attgaatgtgctggaagaaaaggagtgtttccggagcctaatcatgatccagtgattcag
attgcttcaatggttattcggcaaggagaactagaaccatacctcaggaatgtgttcacc
ctcaatacctgtgccccaatagttggatctcaagtgctcagctttcagtctgaagctgaa
atgttagctagatggtctgattttttcagagaactagatcctgatataattacaggatac
aacattagcaattttgattggccatatctcataaatcgtgcaaagcatctgaaagttgaa
aattttgactttttgggcagaattaaaaatgttagatctgtaattaaagattcaatcctt
caatcgaagcaaatggggcgtagagaaaacaaaagcgttaattttgagggcagagtccca
tttgatttgctacttgtacttgtgagagactataaattgcgatcatacactctgaatgct
gtgagttaccactttctgcaggaacagaaggaggatgttcatcacagcatcattagtgat
ttacagaatgagaatgaacaaaccagaaggagactggccatgtactgtcttaaagatgca
tatttgcctttaaaacttcttaataaattgatgtgcataataaatcacatggaaatggct
agagtaacaggtgttcccttgttatgtttactcacaagagggcaacaaattaaagtagta
agtcagcttctaagaaaggcaaaagatgctggatatctaatgcctgcttatcacggacaa
ggatcagatgaccaatttgaaggagcaactgtcattgaaccaaaaaaaggatattatgct
gatcctatttcaactctggattttgcttctctatacccaagtataatgatggctcacaac
ttgtgttataccaccttggtgcccccaaatgtactaaaagacttgaacttaagtgctgat
gatattacaacaacaccatctaagaatatgtttgtcaaggctaatgtgagaaagggtttg
ttgccagaaattttggaatccttgctagctgctaggaaaaaagctaaagcagatttgaaa
aatgaaaaagatccttttaaacgatcggtattggatggaagacagttggcactaaagata
agtgccaactctgtgtatggttttacaggagcacaggttggcaagttgccatgcttagag
atatcaggcagtgtaacagcttatggaagaactatgatagaatttactaaatcagaagtt
gagaaaaaatacactaaagccaatggttacaaggaagatgctgtagtcatctatggagac
accgattcagtcatggtcaagtttggcgtgaaaactctggaagagagcatgcagctgggc
agtgaagctgctgagttcgtcacagcacaatttgttaagccaatcaaacttgaatttgaa
aaagtttattatccatacctacttataaacaagaaaaggtatgctggtctttattttact
agaacagataaatacgataaaatggactgcaaaggtattgaaactgtgagaagagataat
tgcccacttgtctcaaacatgatgagcacatgccttcagaaattactgattgatagagat
cctgatggagcagtaaactatgccaaacaaattatagcggatttgctctgtaaccgcata
gacatttcacaacttgtaattacaaaagaactgacaaagaatgattatgctgctaagcaa
gctcatgtagaattggcaaataaaatgaaaaaacgtgatcccggaaccgcgccaaaactc
ggggacagagttccctatgtgctatgttgtgctgccaaaaacactccagcctacatgaaa
gccgaagatcccatatatgttctggagaacagtgtcccaatagatttcaattactattta
gaaaatcaactctcaaaaccattgctccgaattttcgagcccattcttggagaaaaggct
gaatctttgcttctcaaaggtgaacatacaagaactaaagcaatggtcacttccaaagtt
ggtgctttagccgcttttaccaagaagaggngaaaatgcataggatgtaaaacagttatg
cctaatgactcgaagtctgccttgtgcagtcattgtacaccgaaggaagggcaactttat
attactgagatattcaaactcagacagctccaagataagttttcacgtctctggacagag
tgtcaaagatgtcagggcagtcttcatgaagaggtattatgtacaaacagggactgtact
attttctacatgagaaagaaagttggaatggaactagatgctcaagaaaaaaatgtttcc
agatttggagtgcccagttggtga
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integrated database retrieval system
