Leguminivora glycinivorella (soybean pod borer): 125228522
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Entry
125228522 CDS
T09956
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03013
Nucleocytoplasmic transport
lgly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125228522
09122 Translation
03013 Nucleocytoplasmic transport
125228522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125228522
03041 Spliceosome [BR:
lgly03041
]
125228522
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125228522
Spliceosome [BR:
lgly03041
]
Complex C
Other components
EJC/TREX
125228522
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125228522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
125228522
NCBI-ProteinID:
XP_047989071
LinkDB
All DBs
Position
8:complement(5161487..5191765)
Genome browser
AA seq
1417 aa
AA seq
DB search
MMKSFTKFVSEYCKTWDKSGKEQFIKAVTQSIKDEEKSPLLTKSGKLSGLSENIYDLLLC
GLRGALKRDAVLSALQEICALHADIPSIVLDVVCXTDAETCTDIQSEERSNFCYIVRELE
SFISEKLLKERLEIDTLQDVGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYAKLI
VELNQEVTEETEWKGLLEIIQSLIGCFNLDPNRVLDIILESFEARPHLDSLFISLIKNYM
GDPQVISEVLGFKLGNMEVLEKYDEPPPLMTVIALLLQHQVIALDNIYPWLRPDDTIMAK
EADKEFKAVQEYIRKINIVSTKGPQANAPTEFVEDKSDPQDYWGNQKLVLSEALLLVNAW
REFAALAARLPGAGLAERPARALARMLHALVEPLYRKHCRVAPKIMGTPIPPLTSPLAPP
ACATFEDLKETVIPALILLGPSLHYDPILMYKVIRILRTSRSLKEDPLQHEALTVLDAAI
LPSLTLMEGNCCMAEEVYTLLKLYPYQCRYCLYSRWKNESGERLPALLRVRGNSLQRIKH
IMKRVSKENIKPQGRLIGKLSHAAPQFLFDYMLLQIQTYDNLIGPVVESLKYLTALSLDV
LGYCLLEALVACRAMRGAAYPPWLQALAAFAGAAFKKHNIELTALLQFVANRLKAHQSQD
LLILKEIVQKMAGIEAAEEMTAEQLDAMAGGELLKGEAGYFSQVRNTRRSSARLKEAIVG
NNLDISLCILAAQQRHCCVWKVLDIDEDISSGEPPGSQLKVVGRLADQCQDALVQLGTFL
ASSHAPDEYAARLPPLQELLRDYHVDADVAFFLHRPVLAQKVAAKVELLRKSSDSKTTSP
EMALERYSVASKEALEPVVQAITPLLPLRTWEDISPEFYVTFWSLSMYDLKVPEDCYDRE
IERLKAAAAAAAKDSSQGTKGKKEQERFNTLIDKLQEERVRQQAHVARVAARLARECAGW
FPARAVKSAKNETVTRLMQLCLFPRCVFTPADALFCAEFVHTVHALKTPNFSTLLCYDRL
FCDITYSVMSCTEGEAARYALFLCRVLGTAMRWHADKATFHKECAHYPGFVTKYRVSNQF
TEANDHVGYENYRHVCHKWHYKITKAMVVCLESGDYVQIRNALIVLIRVLPRFPVLAKLA
QIIEKKVEKVREEEKTQRQDLYVLATGYSGQLRNRMSSMMRESEFHQVVQLQSSDKHKAA
PAPAHAAAPAPAPRDDAHEAEPAAHAQDSDKRESRTSDRRREESERDKESKREARVTSKE
RAKEEIRSKERSPRERQHREERYLESVSPPHDHRHPPDDIDRDVKRRKVESSNNGKGKEI
EERSPEKEKRKTKVRGDERKERKMSRKRDRADESAILEQKRRRDEQKAVLKMGGHQNGSQ
EDHHYEKYHKREKSPFRDRSHEEPRDKQRSNESKMRR
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatcgtttactaagtttgtatcagaatattgtaaaacttgggacaaatcagga
aaagaacaatttatcaaagctgtgacacaatctataaaagatgaagaaaagagtccattg
ttgacaaagtctggaaagctatcaggattgtctgagaatatttacgacctactgctttgc
gggctgcgcggggcgctgaagagagatgctgttctgtctgcactccaagaaatatgtgct
ctacatgcagatataccgtctatagttctcgacgtggtttgcngtactgatgcagagaca
tgtacagacatacagagtgaggagcgctccaacttctgctatattgtgagggaattagaa
tcatttatatctgaaaaacttttgaaggaaaggctggaaattgataccctacaggatgtt
ggtacattgaagaacaaaaacttttacaccaaatttatcaaaatcaagacaaagttgtat
tataaacaacgtaaatttaatttattcagagaagagagtgaaggatatgcgaaattaatt
gtagagttaaatcaagaagttacagaagaaacagaatggaaaggattattagaaatcatt
caatcacttataggttgtttcaatttggatccaaacagagtattagacataatactagag
tctttcgaggctcgtccccacctagactcgctattcatatccttaatcaagaactacatg
ggtgacccgcaagttatatcagaagttttaggattcaagctgggcaatatggaagtgtta
gaaaagtatgatgaaccgccgcccctcatgacagttatagcactgttgttgcaacatcaa
gttatagctttggacaacatctatccttggttacgccctgatgatacgataatggccaaa
gaagcggataaggaatttaaagccgtacaggagtacattcgcaagatcaacattgtgtcc
actaaaggaccacaggccaatgcccccacggaatttgttgaagataaatctgatccacag
gattattggggcaaccagaagctggtactgagcgaggcgctcttgctagtgaacgcgtgg
cgcgagttcgcggcgctggcggcgcggctgcccggcgccggcctcgccgagcggcccgcg
agggcgctggcccgcatgctgcacgcgttagtggaaccgctctacaggaaacattgccga
gtcgctccaaagatcatgggcacgcctatcccgccgctgacgtccccgctggcgccgccc
gcgtgcgccacgttcgaggatctgaaggagaccgtcatcccggcactcatcctgttgggg
ccttcgctgcattatgaccccattttgatgtacaaagtaatacgtatactgcgaacgtcg
cgttcgctcaaagaagatcccctgcaacatgaagccctcactgtgctcgatgccgccatc
ttgccctcgctcacgctcatggaaggcaattgttgcatggcagaagaagtttacaccctg
ctcaaactttatccatatcaatgcagatactgcctctactctcgctggaagaacgaatca
ggcgagcgtctaccagcgctactccgcgttcgaggcaactcgctccagcgcatcaagcac
atcatgaagcgagtctcaaaggagaacatcaaaccccaaggccgccttatcggcaagctg
tctcacgccgcgccacagttcctcttcgactacatgctactgcagatccaaacatacgac
aacctgatcggtcccgtagtggagtctctgaagtacttaaccgccctgtctctggacgtg
ctcggctactgtctgcttgaggcgctggtcgcctgccgcgccatgagaggggcggcttat
ccgccgtggctgcaagcgttagctgccttcgctggtgccgcattcaaaaaacacaacatt
gagctgactgccttgcttcaatttgtggccaaccgactcaaagcacaccagagccaagac
ctgcttatattgaaagaaatagtacaaaagatggctggcatagaggctgctgaagaaatg
acagccgaacaattagatgctatggccggaggcgaactactgaaaggagaggctggatac
ttctctcaagtgcgcaacactaggaggtcatcggcgcggttaaaagaggccatcgttggc
aacaaccttgacatatcactctgcatactggccgctcaacaacgccactgttgtgtatgg
aaagttttagatatcgatgaggatatatcaagcggtgagccccccgggtcgcagctgaag
gtggtggggcgcctggcggaccagtgccaggacgcgctggtgcagctcggcaccttcctc
gcctcctcgcacgcgcccgacgagtacgcggccaggctgccgccgctgcaggaactcctc
cgtgattaccacgtggacgccgacgtcgcgttcttcctccaccgaccagtgttagcacag
aaagtcgccgccaaagtcgagctgctccgcaaaagttccgacagcaaaaccactagcccc
gagatggcgctggagagatacagcgtcgcatctaaagaggctttggaaccagtagttcag
gccatcacacctctgctgcctctgaggacctgggaggacatttcaccagagttctacgtc
acgttttggtctctgtcgatgtacgatctaaaagtccccgaagactgttacgaccgagag
atagaacgtttaaaggccgccgcagccgccgccgccaaggattcctcgcagggaaccaag
ggcaaaaaagagcaggagcggttcaacacgcttatagataaactgcaggaggagcgtgtc
cgtcagcaggcgcacgtggcgcgcgtggcggcgcgtctagctcgcgagtgcgccggctgg
ttccccgcgcgcgcggtcaagtccgccaagaacgagacggtcacgcggctcatgcagctg
tgcctgttcccgcgctgcgtgttcacgccggccgacgcgctcttctgcgccgagtttgtg
cacactgtacacgctctcaagacgcccaacttctccacgctgctgtgctatgaccggtta
ttctgcgacatcacgtactcggtaatgtcatgcacggaaggcgaagcggcgcgctacgct
ctattcctgtgtcgcgtgctcggcacggctatgcgctggcacgcagacaaggccaccttc
cacaaggagtgcgcgcattaccccggcttcgtcaccaagtaccgcgtgtccaaccagttc
accgaggccaacgaccacgtgggttacgagaactacagacacgtgtgccacaagtggcac
tataagattacgaaggcgatggtggtgtgcctggagtcgggcgactacgtgcagatccgc
aacgcgctcatcgtgctcatccgcgtgctgccgcgcttccccgtgctcgccaagctggcg
cagatcatcgagaagaaggttgagaaggtgagagaagaagaaaagacacagaggcaggac
ctgtacgttctggcgacgggctacagcggtcagctgcggaatcgcatgtccagcatgatg
agggagagcgagttccatcaggtggtgcagctgcagagcagcgacaagcacaaggccgcg
cctgcgcccgcgcatgcagccgcgcccgcgcccgcgccgcgcgacgacgcgcacgaggcg
gagccggcggcgcacgcgcaggattcagataaacgagaatcccgcacgagcgaccggcgc
cgagaggaatccgagcgtgacaaagaatccaaacgcgaagcacgagtgacctctaaagaa
agagccaaagaagaaataagaagcaaagaaagatcacccagagaacgtcaacacagagag
gagcggtacctggagagcgtgtcgccgccgcacgaccatcgccatccgcccgatgacatc
gatcgagatgtgaaacggcgtaaagttgaaagcagcaataacggcaagggcaaagagatt
gaggaacgatcacccgagaaggaaaagcgaaagacaaaagtgagaggtgatgagcgtaaa
gaacgtaagatgagccgcaaaagggatagagctgatgagtcagcaattttagaacagaaa
agacggcgcgacgaacaaaaagctgttttaaagatgggaggccaccaaaacggatctcag
gaagatcatcactacgagaaatatcataaacgggaaaagtcgccgttcagggatcgctcg
catgaagaaccaagagataaacagcggtctaacgagtcaaaaatgagaagataa
DBGET
integrated database retrieval system
