Leguminivora glycinivorella (soybean pod borer): 125228546
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Entry
125228546 CDS
T09956
Name
(RefSeq) high mobility group protein DSP1-like isoform X1
KO
K10802
high mobility group protein B1
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03410
Base excision repair
lgly04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125228546
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125228546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgly03036
]
125228546
03400 DNA repair and recombination proteins [BR:
lgly03400
]
125228546
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgly04147
]
125228546
Chromosome and associated proteins [BR:
lgly03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
125228546
DNA repair and recombination proteins [BR:
lgly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125228546
MMR (mismatch excision repair)
Other MMR factors
125228546
Exosome [BR:
lgly04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125228546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
NAT_N
Motif
Other DBs
NCBI-GeneID:
125228546
NCBI-ProteinID:
XP_047989106
LinkDB
All DBs
Position
8:15508493..15525889
Genome browser
AA seq
499 aa
AA seq
DB search
MGDRGATGGAWGARDEASWWPGSTGDLQQQQQQQQQLNEEIARSTAAATHQLYTYKMTGG
FSNNAGDNSTSSYDYRLVSGSNNREESPQQSWWYASGSVDAHQQASSPTSQNQSSPDPEQ
GTQQANGIQNHQSLQSQEQNQALQQQGQIQQLIQLNLRKELQQAQTLQQTLQQQQQQNQQ
QTLQQMLQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQSLQQTLSQAQAQALVQAQAVLQ
QQVAQSLQQQQQTLQDHLQAVQQQQIQAALQQQSATLQELQQQAQQQQQALIAQSANKTA
AKMPRARAYNKPRGRMTAYAFFVQTCREEHKKKHPDENVVFAAFSKKCAERWNTMSEKEK
QRFHEMAEQDKKRYDLEMQNYVPPKDVKIGRGRRRQQYKDPNAPKRSLSAFFWFCNDERS
KVKANNPEYSMGDIAKELGRRWAAAEPETKSKYEALSEQDKARYDREMTAYKKGPLGLVQ
QPTQEVEEIGDFEADEEYK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcggggcgcgacggggggcgcttggggtgcgcgcgacgaggcctcatggtgg
cctggaagcacaggagatctacagcagcagcaacagcaacaacaacaactaaatgaggaa
attgcacgaagcacagccgctgctacacatcagttatatacatataaaatgactggtggt
ttttcaaataatgccggtgataactctacatcgagttatgattaccgcttggtatctggc
tctaataatagagaagaatctcctcaacagtcgtggtggtatgcatcaggatcagttgac
gctcaccaacaagcttcttctccgacgtctcagaatcagtcaagtccggatccggagcaa
ggcacacaacaggcaaatggtattcagaaccatcagtccttgcaatcgcaggagcagaat
caggccttacaacagcagggccagatacagcaactcatccaactgaacttgaggaaggag
ttgcagcaagcgcagactttgcagcaaaccttgcaacagcagcagcagcagaatcaacaa
cagacgctgcagcagatgctgcaacaacaacaacaacaacaacaacagcaacaacaacaa
caacagcagcagcagcagcaacaacagcagcagcagcagcaacagctgcagcagagctta
caacaaacattgagccaagctcaagcgcaggctctagtacaagcgcaagcggtgttgcag
caacaagttgctcagtcattgcagcaacagcagcaaacactgcaggatcacttgcaggct
gtacagcaacaacaaatacaggctgctttgcagcaacaatctgcaacattacaagagttg
cagcagcaagcgcaacagcagcagcaggcgttaatagcgcagtcggccaacaagacagca
gcgaagatgccgcgcgcacgcgcgtacaacaagccgcgcgggcgcatgaccgcgtacgct
ttcttcgtgcagacgtgtcgcgaggaacataagaagaaacaccccgatgagaatgtcgtg
ttcgcggcgttttcgaagaagtgtgctgagcggtggaatacgatgtcagaaaaggagaag
cagaggttccacgagatggcagagcaggacaaaaagcggtacgacctggagatgcagaac
tacgtgccgcccaaggacgtgaagatcggccgcggccgccgccgccagcagtacaaggac
cccaacgcgcccaagcgatcgctatcggcgttcttctggttctgtaacgacgagcgctct
aaggtgaaggcaaacaaccccgagtactccatgggcgacatcgccaaggagctcggtcgc
cgctgggctgccgccgagcccgagaccaagtccaagtacgaagccctgtctgagcaggac
aaggcaagatatgacagggagatgacggcgtacaaaaagggccctctaggactcgtccag
cagcccacgcaggaggtggaagagatcggggatttcgaggccgacgaggagtacaagtga
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