Leguminivora glycinivorella (soybean pod borer): 125229760
Help
Entry
125229760 CDS
T09956
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125229760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgly03400
]
125229760
DNA repair and recombination proteins [BR:
lgly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125229760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
125229760
NCBI-ProteinID:
XP_047990654
LinkDB
All DBs
Position
9:16110820..16158827
Genome browser
AA seq
913 aa
AA seq
DB search
MSSTQPIHALNLDSVQQQAFIKYYNALPDKPPTTVRIFDRNEYYSVHGVDATTCSREVFS
SIANIKRMGLEPNKLEYLVLSKGNFEILIKKLLLVRRYRVEIYVAEGSVKNSDWVIKYKG
SPGCLSQLEEVLGEGLGSTDDSTPCLMAVNIKTDPVTKGRLVGVACVTAGDYELSVTEFT
DDDLLTELETITVQMAPSECLVPQVEHEDYKSLKKVMERASVTVTKLKRSEFSTEGLIQD
LNRLLKFKPDQQQDANAFEETRKETAMCCLAAAIKYVSLMTENTNFGRFRLSTIKADMFL
HLDAAALSALNVLPELGDAPLPSRSLLGLLDRCRTQQGKRLLAQWLRQPLRDINLINERL
DVVTLLVDNSALRLQLHDDHLRRVPDLRALARRLTRKKANLHDCYRIYQAIKRLPALLNC
LAEADNATVHSSIAEPISELTEDLGKFQEMIETTVDMEAVDRGEFLVNPSFDEQLQALRT
ELDNLQSSADKELNRAARDLGLDAGKTIKLESTPNGFCFRVTMKEEQALRNNKKYTIIDA
VKGGVRFKTGRLGDLTEEYVQTRTNYEKEQDKVVAEIVGIASGYSECLFCLSHVLSRLDV
LVSFAVAAVSAPEPYCRPVVTENIDEFVLKDLRHPCLEVQEGVSFIPNDVMFKRDSCLMH
IVTGANMGGKSTWMRSCGAAALLAHAGCLVPASSATIPRLRALCARVGAADREQRGQSTF
MLEMIESATILKTATPDSLVLIDELGRGTSTYEGCGIAWAIAEELATKCKCFCLFATHYH
ELTRLPNLHPSVIVNSHAEASVVDQQLLLLHKIAPGPATHSLGLHVAKLADLPDSIIEYA
EAKQAELETNLFEAANIDDAESEAGQAMILDFLRKCKQLASNPSNEVLAKQIGDLKKDLM
KQDNKYLQALMAN
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaacgcaaccgattcatgcactaaatctagactcggtgcagcagcaagccttc
attaaatattataatgcattaccagataaaccgccaacaacagtgcgtatattcgaccgc
aatgagtactacagcgtgcacggtgtggacgcaaccacctgttctagagaggtcttctca
tccatcgcaaacatcaagagaatggggctcgagcccaacaagctggaatacctcgtgctg
tctaaaggaaacttcgagattctcatcaagaaactgctgctggtgcggcgttaccgtgta
gaaatatacgtagcagaaggttcggtcaagaacagcgactgggtgatcaaatacaaaggt
tcgccaggatgcctgtcacagctagaagaagtgctgggcgaaggcctgggctctactgat
gatagcacgccgtgtctgatggcggttaatatcaagactgatcctgttactaagggacga
ctcgttggagtagcatgcgtcactgcaggcgattacgagttgtcggtgacggagtttacg
gacgacgacttgctgacagagctggagacgattaccgtacagatggcgccttcagagtgt
ctcgtgcctcaagtggaacatgaagattacaaatccctaaagaaagtaatggagcgcgcg
agcgtcacagtaaccaagctgaagcgaagcgaattctccacggaaggcctgatccaagac
ctgaacagactgctaaagtttaaacccgatcagcagcaggacgcgaacgcgtttgaggag
acgaggaaggagaccgcgatgtgctgtctggcggcagctatcaaatatgtgtctttgatg
actgagaatactaattttggcagattccgactatccaccatcaaagcggatatgtttctc
catttggacgccgcggcgctctctgcgctcaacgtgctgccagaattaggagatgcgcct
ttaccttccagaagcctgttaggcttgctagaccgctgtcggacgcagcaaggaaaacgg
cttctagcccaatggcttcgccagcctcttcgagacataaacctgatcaatgaacgtcta
gatgtggtgactctcctagtagacaactcggcactgcggctacagttgcacgatgaccat
ctcaggagggtccctgaccttagggcgttagcacgaagactgactaggaagaaagccaac
ctgcatgattgctataggatctatcaagccatcaaacgtctaccggctctcctaaactgc
ttggcggaggccgacaacgcaacagtccactcttcaatcgccgaaccaatttctgaattg
accgaagacctcggcaagttccaggagatgattgagaccactgtcgacatggaggcagtt
gatagaggcgagttcctagtgaacccctcattcgacgagcaactgcaagcgttacggact
gaacttgacaaccttcagtcgtcagcggacaaggaattgaacagagctgcccgcgacctg
ggcctggatgctggcaaaactatcaagctggaaagcacaccgaatggattttgctttaga
gtaacaatgaaagaagagcaagcccttcgcaacaacaagaagtacaccataattgacgcc
gtcaagggtggtgtcaggttcaaaactggcaggctaggagacttaactgaagaatatgtg
cagaccaggaccaactatgagaaagaacaagacaaggtggtagctgaaatcgtgggcatt
gcatcgggctactccgagtgcttgttctgcctgtcccacgtgctctcgcgcctcgacgtg
ttggtctcgttcgcggtcgcggccgtctccgcgcccgagccatattgccggcccgtcgtc
actgaaaacatcgacgaatttgtgttgaaagatttaagacacccttgccttgaggtccaa
gaaggcgtgtcttttatacctaatgacgtcatgtttaaaagagactcatgcctaatgcac
atagtgaccggggctaacatgggcggcaaatccacctggatgcggtcctgcggcgcggcc
gccttactcgcccacgcggggtgtttagtgcccgcgtcctcagcaaccataccgaggcta
cgcgcattatgcgcccgtgtgggagccgctgacagggagcaacgcgggcaaagcacgttc
atgttagagatgattgagtccgctactatactgaagactgcaactcccgactctctagtg
ttgatcgacgaactcggccgaggcacgtccacctacgaagggtgcgggattgcttgggct
atcgcagaggagctagcaacgaaatgcaaatgcttctgcctcttcgcgacgcactaccac
gagcttacccgcctgccaaacttgcatcccagcgtcattgtgaactcgcacgccgaggct
tccgtagtcgaccaacagttgttgctacttcataagatcgcccctggtccagctacacat
tcgttaggacttcacgtagctaagttggctgatctacctgactctattatagagtatgcc
gaagccaagcaagcagaactagaaaccaacttattcgaagcagccaacatagacgatgca
gaatccgaagccgggcaggcgatgatactagacttcctgcgtaagtgcaagcagcttgcc
tccaacccgtccaacgaggtgctggctaaacaaataggagatctgaagaaagacttgatg
aagcaggataataaatatctgcaggcacttatggcgaactaa
DBGET
integrated database retrieval system
