Leguminivora glycinivorella (soybean pod borer): 125230143
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Entry
125230143 CDS
T09956
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125230143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125230143
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125230143
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125230143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
125230143
NCBI-ProteinID:
XP_047991133
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All DBs
Position
10:3203319..3249931
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AA seq
653 aa
AA seq
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MAAGTETNKTEEKTSRKRGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKK
EIKKLQRLRDQIKSWIASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGA
AQKLDPAQKERDEMSAWLVQSIDALNLQVDQFESEIESLLVGKKKRLDKEKQDRMEELKQ
KLEKHRFHIKKLETLLRMLDNMSVEVEQIKRIKDDVEYYIDSYLEPGFEENEYIYDDING
LDDIELSGVGLPSSATTDSNSNESNGSPTSIISGTSPIPSPTLEVHNHSTDSIDIEKKKK
EEVIAKPVKPLPLRAASSVVNNSTSLVSSLLNNSAASTNSINNTGVSGASTPSKPPPSPP
HHAPHALPHAPPHRQPNNTEIVENGPVPAAPHPAPPAPVPPPPTSKSSIAPAPSVPTEPA
VSPLTVNGPLHHHPHTPQHTVNNGRGEATTPLLAGAGGTASLKSMAQEAVQRAGLTTQGQ
NVRRGAALAQAHIPPLLGVAPLGPLPLNSEHQLQFQMMEASFYHMPHPSDSERARHYLPR
NICQTPQYYNQVVVPHSDSVEFFQRLSTETLFFVFYYMEGSKAQYLAAKALKKQSWRFHT
KYMMWFQRHEEPKLINEEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggcacagaaaccaataaaacagaggaaaaaacatcgcgtaaacgaggtgaa
atagacaggtgtttaaaaaaggtaacggaaggggtggagacgtttgaggacatttggcag
aaggttcacaatgccactaacagtaaccagaaggagaagtatgaggcagatctcaagaag
gaaattaagaaactccagaggttacgagatcaaatcaagtcttggatcgcctccggagag
attaaggataagagtacacttttagaatataggaaactaatagaaacgcaaatggaaagg
ttcaaagtagtggaacgggagacgaagacgaaggcctactcgaaagagggcctcggcgcc
gcgcagaagctagatcccgcgcagaaggaacgcgacgagatgtccgcgtggctcgttcaa
tccatagacgcactcaacctacaggttgaccagttcgagtcagagatcgagtcgctgctg
gttggcaaaaagaagcggctggacaaagagaaacaggatcgcatggaggagctcaaacag
aagctagagaagcaccgcttccacatcaagaagctcgaaaccctgctgcgcatgctagac
aacatgtccgttgaagttgaacagataaaaaggatcaaagacgacgtagaatactacata
gactcatacctagaacccggattcgaagaaaacgagtacatatatgacgatatcaacggt
ttggacgacatagagttaagcggcgttgggctaccatcctccgcgaccacggactcgaat
agtaatgagtctaacggctcccccactagcattatatcaggaacaagtcccattccgtct
cccacgttagaagtccacaaccactccacagattccatagacattgagaagaaaaagaaa
gaagaggtcatagcgaaaccggtaaagccactgccgctgcgggcggcgagcagcgtggtc
aataatagcacgtcactcgttagttccttgctcaataactccgccgcctccaccaatagc
ataaacaatacgggcgtgtcgggcgcgtccacgcccagcaagccgccgcccagcccgccg
caccacgcgccgcacgcgctgccacacgcgccgccgcaccggcagcctaacaacaccgaa
atagtggagaacggccccgtccccgccgcgccgcaccccgcgccgcccgcgcccgtgccg
ccgccgccgacgtcaaagagttcgatcgcgcccgcgcccagtgttcccacggagcccgcc
gtgtcgccgctcaccgtcaacggcccgctccaccaccacccgcacacgccgcagcacaca
gtcaataatgggcgaggtgaagcgacgacgccgctcctggcgggcgcgggcggcacggcg
tcgctcaagagcatggcgcaggaggcggtgcagcgagcggggctcaccacacaaggacag
aacgtgcggcgaggcgcggcgctagcgcaagcgcacatcccgccgctactcggcgtggcg
ccgctcggcccgctacctctcaactcggagcaccagctacagttccagatgatggaggcg
tcgttctaccacatgccgcaccccagcgactcggagcgcgcgcggcattacctacccagg
aatatctgccagacccctcagtactacaaccaggtggtagtccctcactcagacagcgta
gagttcttccagcggctctcgacggagacgctcttcttcgtgttctactacatggaaggc
agcaaggcgcagtacctcgccgccaaggcactcaagaagcaaagctggcgcttccacacc
aagtacatgatgtggttccagcggcatgaggagcccaagctcatcaacgaggagtatgag
cagggcacgtacatctacttcgactacgagaagtggggccagcgcaagaaggagggcttc
acgttcgagtacaagtacttagaggaccgggacctgaactga
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