Leguminivora glycinivorella (soybean pod borer): 125230166
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Entry
125230166 CDS
T09956
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125230166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgly03021
]
125230166
Enzymes [BR:
lgly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125230166
Transcription machinery [BR:
lgly03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125230166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
DUF6179
Motif
Other DBs
NCBI-GeneID:
125230166
NCBI-ProteinID:
XP_047991177
LinkDB
All DBs
Position
10:18018829..18024903
Genome browser
AA seq
1663 aa
AA seq
DB search
MAFKTAFTAALKGLTSVDPNGVQFLLFSDDDIRKLSVAKITNTQTFDSMGNATKGGLYDP
ALGPIRDRNELCGTCSNPLLHCQGHFGHIELPLVVVNPLFIKNIYTLFRISCLKCCKMQL
NDKMKTLLTLQLQLVDVGQVTAALDLENLYNNDAIWGDKKDNVPKIIRKYQKLLKQNDPV
AETFSNKNSDRLRSKIVNNVFKSVSTSKLCLHCKGRIIKVTTSENRIMHTFISDNKETKG
IKILMPDEIKRYCTSIAQNNEDILKECFPILKHSKTDPATNIFFMEIIPVIPPSLRPCNV
LRGEVVEHPQNNIYKAIMTMSYNARAVLQVLASPTQKTVDNLDQEPRQAYESVHGASAAE
KLHTVWQDLQKYVNFILNCEGQSLTSLGLKQVIEKKTGVIRMHMMGKRVNFAARSVITPD
PNVDIDEIGIPDAFATKLTYPVPVTEWNVEELRKMVINGPNKHPGAEKLEIENGRVILIP
ADSIQKRKSIAKRLLTPDEYKKSSLKIVHRHLVNGDVLILNRQPSLHKPSMMAHRARILK
GEKTLRLHYANCKSYNADFDGDEMNAHFPQKEIARSEAYHIMSVRKQYLVPKDGTPLSGL
IQDHVISGVKMSLRGTFFTKTDYQQLVFQALSNHRGEIKLLPPTILKPMVLWSGKQVLST
IIINSIPKGKPYLSLTSNAKISSKAWQKTPPRPWKAGGSKLEGDNMTEAEVIIQKGELLS
GVLDKTHYGATPYGLVHCMYELYGGDSSSALLSSFSKVFSFYLQWIGFTLGVKDILVVEE
ANKKRDDYISLVRNTGKIAAAKATDLPVDVDDNTLKETIEEMMQKDPKFRANLDRQYKNL
LDTHTNSINTACLTEGLLEKFPYNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPL
MISGRSLPSFPPYDVSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYL
QRCLIKHLEGLSVGYDHTVRDGDGSVIQFAYGEDGLDVLKCQFLKGKQFGFLDVNAGAVV
SKSVINTLKEDSDNKSIAKAQKSLKKWKKKHGDPFAKVRTSPFTEFSKVARNNIDLDEKP
TDETRDPYYWELEKMWRSLDEEERQQYARKKCPDPIPSKISPEFKFGAINEQLDGIIHSY
LKNRKENAFTKLTDKEKFTEVINAKYLESMADPGEPVGLLAAQSIGEPSTQMTLNTFHFA
GRGDMNVTLGIPRLREILMTASLKLKTPNMDIPFKDLPDLNKKAERLRQKLNRVTVADVL
EKIDVDCEIVTEPNRQLKTTLKFWFLPKAQYKTQYAVKPKQIINHMARKFFAEMFVAVRK
QARTSSGVVWSAEKKKRPRRRDEDDEEDVGEEAPAEKEPAADPDDSSDDEPTNDDDDATQ
VKKRNKRAEEQEYEDPESEDEEKSDDEDMNDDQAGDNDNADKDNGEAADVSAADKTTMHE
VVSKIDSATNYSFDTKNHQWCELTVLFPIAFLKVDLSQALRDAAAKSVIREVKNIKRAIT
NRENNVLFLKTDGINIVEMFKYDDLLHVDKLYSNDVHAIARTYGIEAANKVIIKEIKNVF
NVYGITVDPRHLSLIADYMTYNGVFEPMSRKGMEASTSPLQQMSFESSIVFLKEAVLNAK
VDKITSASSCLMLGQPCRCGTGAFDVRPLIKPINNKKKFDEDE
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaagaccgcattcacggcagccctaaaggggctgacgtcggtggaccccaat
ggcgtgcagtttttattgtttagcgacgatgatatccgaaaactcagtgttgcgaaaata
actaatacccagacgtttgactcaatgggtaacgctacaaaaggggggctttatgatccc
gcgctaggacctatcagagacagaaacgagctatgtggaacttgcagcaatcctctcctt
cattgccaagggcattttggacacattgaactacctttggtcgtagtcaaccccttgttc
attaaaaatatctacacactgttccgaatcagctgtttaaaatgctgcaaaatgcaacta
aatgacaaaatgaaaactctcttgacgcttcagttgcaattagtggatgttgggcaggtg
actgcagctttagacctggaaaatctgtacaacaatgatgctatttggggagataaaaaa
gacaatgttcccaaaattatcaggaaatatcaaaaactattaaaacaaaatgatccggtg
gctgaaacttttagtaacaaaaattctgatagattgagatcaaaaattgttaataatgtt
ttcaaatctgtcagcacatcaaagttgtgcttgcattgtaaaggtagaataataaaagtg
acaacatcggagaacagaataatgcacacattcattagtgataacaaggaaacaaaaggg
atcaaaatattaatgcctgatgaaataaaacggtactgtacttctatagcacagaataat
gaagatattttgaaagaatgctttccaatattgaagcattcaaaaacagatcctgcgaca
aacatctttttcatggaaattattccagttataccaccgtctttacgaccatgcaatgtg
ttgaggggtgaagttgttgaacatccccagaacaatatctacaaggcaattatgactatg
tcgtacaatgctcgtgctgttttacaagtacttgcctcacctactcagaaaacagtggat
aatttggatcaagaaccaaggcaggcttatgaaagtgttcacggtgccagtgctgctgaa
aaacttcatacagtgtggcaagatttgcaaaaatatgtcaactttatcctaaattgtgaa
ggccaaagcttaactagtttaggactcaaacaagtaattgagaagaaaactggagtcata
agaatgcacatgatgggtaaaagagtcaattttgcagcccgttcagtcatcactccagat
cctaatgtggacattgatgaaattggtattcccgatgcattcgctacaaaactcacatat
ccagtgccagtgaccgagtggaatgtggaggagttgaggaaaatggtgataaatgggcct
aataaacaccccggagcagagaaacttgaaatagaaaatggaagggtgattttgattcca
gcagattccattcagaagagaaaaagtatagcaaagagactgttgactcctgatgagtat
aaaaagtctagcctgaagattgtacataggcacttagttaatggagatgttttgatattg
aaccggcagccatcgctccacaagcctagtatgatggctcaccgagcaaggatcttaaaa
ggagagaaaaccctaagattgcattatgccaactgcaaatcctacaatgctgattttgat
ggtgatgaaatgaatgcacattttccacaaaaggaaatagccagaagtgaagcttaccac
attatgtcagtaagaaaacaatatctggtacccaaagatggcaccccactcagtgggctg
attcaagatcatgtcatttctggagtgaaaatgtcactaaggggaacattcttcaccaaa
acagactaccagcagctggtcttccaagccttgtctaaccatagaggagagattaaactg
ctgcctcctactatactgaaaccaatggtactctggtctgggaagcaagtgttatccacc
atcattatcaacagtatcccaaaaggtaaaccatacctttctttgactagcaatgcaaaa
attagctcaaaagcgtggcagaaaacacccccaagaccttggaaagctggtgggtctaaa
ttagaaggagataacatgacagaggctgaagtgatcatacaaaaaggtgaactgctgtcg
ggcgtcttggataaaacccactatggagcgacgccttatggtcttgtgcattgtatgtat
gagctatatggcggagacagttccagtgccctgctcagctcgttttcaaaggtgttcagc
ttctatcttcaatggattggatttacacttggcgtaaaagacattttggttgtggaggaa
gccaataaaaaacgagatgactacatcagcttggtgagaaacacaggaaaaattgccgcg
gctaaagctactgacttgcctgtagatgtcgatgataacacattgaaggaaactattgaa
gagatgatgcaaaaagacccgaaattcagagctaatttagataggcagtataaaaatttg
cttgatacacacacaaacagcataaatactgcttgtttgacagagggattgctggaaaag
ttcccgtataacaatctccagttgatggtacagtctggggcaaaaggttccactgtcaac
actatgcaaatctcttgcctgcttggtcagatcgagttggaaggcaaacgtccacccctc
atgatatctggacggtccctccctagcttcccaccttacgacgtttcgcctcgagctggt
ggcttcatagacggacgctttatgacaggaattcagccacaggaattcttcttccattgt
atggctggtcgtgaaggtcttattgataccgccgtcaaaaccagtagatccggttacttg
caacgatgcctgatcaagcatcttgaaggtttaagcgtgggatacgatcacaccgtaaga
gatggcgacggtagcgtcatccagttcgcttacggtgaagacgggcttgatgttctaaaa
tgccaattccttaaaggaaaacaattcgggttcctggatgtgaacgccggtgctgttgtc
agcaaatctgtcatcaacacactgaaagaagactctgacaacaaaagcattgcaaaagcg
caaaaatcattaaagaaatggaagaaaaaacatggcgatccctttgcaaaagtacgaacg
agcccgtttacagagttttcgaaggtggctcgtaacaacattgacttggacgagaaaccg
actgatgaaacaagagacccctattactgggaactagaaaaaatgtggcgttcgcttgat
gaggaagaaagacaacaatacgctagaaaaaaatgcccagaccccatcccaagcaaaata
tcgccagaattcaaatttggagctataaatgagcagttagatggcattatacacagttat
ttgaaaaaccggaaggaaaatgcattcacaaaactgactgacaaagagaagtttacagaa
gtgatcaacgctaaatacctagaatccatggcggatccgggcgaacccgtcggtcttctc
gcagctcagtcgatcggagagccctccacgcagatgacactgaacaccttccatttcgcc
ggtcgtggtgacatgaacgtgaccctcggtatcccacgtctcagagaaattctgatgacg
gcgtcgctcaaacttaaaacaccaaacatggatataccgttcaaggaccttcctgattta
aacaagaaagctgaaaggttgagacagaaactgaacagagtgacggtagctgacgtgttg
gagaagattgacgtggactgcgagatagtgactgagccgaatcgacagttaaagaccacg
ttgaaattctggttcctgccaaaagcgcagtacaagactcagtacgcggttaagccgaag
caaattataaatcatatggctaggaaattctttgcggagatgttcgtagcggtgcggaag
caagctaggacttcgagcggggttgtgtggtcggcagagaagaagaagcggccgcgccgg
cgggacgaggacgacgaggaagacgtcggggaggaggcgccggccgagaaggagcccgcg
gccgaccccgacgacagctcggacgacgaaccgaccaacgacgacgacgacgctactcag
gtgaagaagcgaaataaaagagcagaagaacaagaatacgaggatccagagtcagaagac
gaagaaaagtcagacgacgaagatatgaatgacgaccaggccggagacaatgataacgcg
gacaaagacaacggcgaagcggccgacgtgtcagccgccgacaaaacaaccatgcacgaa
gttgtaagcaagatcgacagcgctaccaactacagtttcgacaccaaaaaccaccaatgg
tgtgaactaaccgtgctcttccctatagcattccttaaagtcgatctatcacaagcactc
agagacgccgctgcaaaatcagtcatacgcgaagtcaaaaatatcaagcgagcgatcacc
aacagggaaaacaatgtactattcctcaagacggatggtataaacattgttgaaatgttc
aaatatgacgatttgctgcacgttgacaaactgtacagcaacgatgttcatgctatagct
cgaacttacggcatcgaggcagctaacaaggtgattattaaggagattaagaacgtgttc
aacgtttatggaattacggtggatccgagacatttgtcactgatagcggactacatgact
tacaatggggttttcgagccgatgagtcgaaaaggaatggaagcctcgacgtctcctttg
cagcagatgtctttcgagtcttcaattgtattcctaaaggaggctgtgttgaatgctaag
gtggataagatcacttcggcgtcgagttgcctgatgttaggacagccttgcagatgtggg
acaggcgcgttcgacgtacggccgctcataaagccgataaataataagaaaaagtttgat
gaagatgaatag
DBGET
integrated database retrieval system
