Leguminivora glycinivorella (soybean pod borer): 125230279
Help
Entry
125230279 CDS
T09956
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03440
Homologous recombination
lgly03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125230279
03450 Non-homologous end-joining
125230279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgly03032
]
125230279
03400 DNA repair and recombination proteins [BR:
lgly03400
]
125230279
DNA replication proteins [BR:
lgly03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
125230279
DNA repair and recombination proteins [BR:
lgly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
125230279
BRCA1-C complex
125230279
NHEJ (non-homologous end-joining)
MRX complex
125230279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
SbcC_Walker_B
AAA_21
AAA_29
SHE3
OVT1
ABC_tran
Seryl_tRNA_N
AAA_16
AAA_5
AAA_13
Motif
Other DBs
NCBI-GeneID:
125230279
NCBI-ProteinID:
XP_047991352
LinkDB
All DBs
Position
10:13893982..13911203
Genome browser
AA seq
1303 aa
AA seq
DB search
MAGIKSLAIRGVRSFGPDDADEQRISFDKPLTLILGQNGCGKTTIIESIRYAITGQMPPG
SRNECFVHDTKINRTTEVQGQVKLKIVNANDKQLEVSRSMRVTCMAKKKPVFKTLDSFLS
IIDEQGRVKDISSRCADLDSVMHQELGVSKAILNSVIFCHQEEASWPLDEGKKVKERFDE
IFDADKYSVCFDRLRKIRKEYATSIKLLEQSVAHLTEQKEELDKKKLNVVNDESRISDAE
LKVSKITQELNPITEKLKAIEMLQKNLVAFESKREKIKARLEHCQTQEKELKKDIKNIFE
GSITELQENMDNYGTTIKAKETELIESNKKIFSFNKDEEKVTNEQMANEVKFNKLMLLES
QNQDRTDKKNNMIVETAKLAEIDMQPIESNEEADAAINTVTDRIKSLQKDLEELKSMADA
EENKLQSLVNASIDALSRHEQKISNKESEIKTVRNNIVKIEREIIDANESKLRLETLDKK
VKTAEEEYEATVKELNTEECQREINDDEKVIEQHEHELEQLNEKVTKLQKQSAKLKERDI
IEESLKQKEKQLMLLKNKHRTAITELLGRMPENGFTMAIQKFDLEISAEVESMKKKLKEK
HIEVTSQEAERKHVREMLNDRRSELTKAEDQMYKACGTQSYETTLTKLNSTVEKLQEEQN
LAQSTIYINTKYKAQLKDNNCCPLCSRGFDTETEVTDLISQLTTQVMNVPAKLEKITEEL
QRASAKKDELLAMRSLNEKIQSLKEKEIPQLEKRLSDVDKNISTISESVEEISMSLMEPE
QKLQTAKQVAGHMPLMDQMITEVKSITKNLEAIKAQCIGLDSDLTLDEATAKQTDLRQKI
STLRTRVKSAQMKLNAHAKKLQAKAEAKNKLKEEYLNIQKKVQELHNLQETLKQYKENIE
KYALELRQLQDATGALKAEKKEREDAKTETVKKNRTAIDTKRTFITKILNSFDKVKTVIN
EIKQHEEKNIQREMDKIKEANERLMEQHKQIVVERDRVTKRIDSLRDELAKQESYKRNLE
DNLKLRKAQTEITSCDKELAEISEKMSGVNMDMISEKGPLINKHTQLLREKAQTEGELKE
IKKRLQQNRLELKKALNKDVEKKYREKFYEMKVTQALDKDIKEYSAALEKCLMEFHREKM
ENINLIIREMWRKIYRGNDIDYIEIKTESSMSADMERRKYDYRVVQSKNNVEIDMRGRCS
AGQKVLACLIIRLALAETFSSRFGILALDEPTTNLDAENVRSLCAALGEIVQERMRQKNF
MFIIITHDKEFIESLGNVDKVTHYYEVSRNDEGKSRLKKIRFT
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaatcaaatcgttagctattcgaggtgtacgaagttttgggcccgacgatgcc
gatgaacaacgaatatcatttgataaaccgttgactcttatccttggacaaaatggttgt
ggtaaaactacaatcattgaaagtattcgatatgccatcacgggacagatgccaccaggc
agtcgaaacgaatgttttgtccatgacacgaaaattaacagaacaactgaagttcagggt
caagttaaacttaagatagtaaatgccaatgataaacaactagaagtgtcaagatctatg
agagtaacatgcatggctaaaaagaaaccagtgttcaaaacattggactcatttctctcc
atcattgatgaacaggggcgagttaaagatatatcttccagatgtgctgacttggattct
gttatgcatcaagaacttggtgtctctaaagcaattctaaattccgtaatattctgccac
caagaagaggccagctggccattggatgagggtaagaaggtcaaggagagatttgatgaa
atctttgatgcggacaaatatagcgtctgctttgatcggctgagaaagatcagaaaggag
tatgccacatctattaagttactagagcaaagtgtagcccatctaactgaacaaaaggag
gaactggataagaaaaaattaaatgttgtgaatgatgagagtcgaatctctgatgctgaa
ctaaaagtgtctaaaatcactcaagagcttaacccaatcacggaaaaactgaaggcaata
gagatgctacagaagaatttagtagcttttgaatccaagagagaaaaaattaaagcaagg
ctagaacattgccaaacacaagaaaaagagctgaagaaagatatcaagaatattttcgaa
ggatcaatcacagagctacaggaaaatatggacaattatggcaccacaatcaaagcaaag
gaaactgaacttattgagtccaacaaaaagatcttctcattcaataaggatgaggagaaa
gttaccaatgagcaaatggcgaatgaggtaaagtttaacaagctgatgttactggaaagc
cagaatcaagatcggaccgataaaaagaacaatatgattgtggaaacagctaaactggct
gaaattgatatgcaaccgatagagtcaaacgaggaagcagatgcagcaatcaacacagta
acagacaggatcaagtctctgcagaaagatctcgaggagttgaaatccatggctgatgcg
gaagagaataagcttcagtcactagtcaatgccagtatagatgccctttcgcggcatgaa
caaaaaatatcaaacaaagaatcagaaatcaagactgtaaggaacaatattgtcaagatc
gaaagagagattattgacgccaatgaatcaaaattacgattggaaacgctggataagaaa
gtcaaaactgcagaagaagaatatgaagctacagtaaaagagttgaacacagaagaatgt
caaagagaaattaatgatgacgaaaaagtgatagagcaacatgaacatgaattagaacaa
ctcaatgaaaaggtaacaaagcttcaaaaacagagtgccaaattaaaagaacgggatata
atcgaagagtctttgaagcaaaaagaaaaacagctaatgctgttaaagaataagcacaga
actgctattactgaattgttgggccgaatgccggagaacggtttcactatggccatacag
aagtttgatttggaaatatcagcggaggtggaatctatgaaaaagaagttaaaggaaaaa
catattgaggtgactagtcaagaagccgaacgtaagcacgttcgagagatgctgaacgac
cgccgcagcgagttgacgaaggctgaagaccagatgtacaaggcttgcggtacacagtcc
tatgagacaacacttactaaattaaatagtactgtggagaagttgcaggaagaacaaaat
ttagcacagtcaacaatatacatcaacaccaaatacaaagcacagctgaaagataacaac
tgttgtcctttgtgtagccgtggattcgatactgaaactgaagtgacagacttaatatcc
caactgacaactcaagtaatgaatgtaccggccaaattagaaaaaatcactgaagaattg
caaagggcctctgccaagaaagatgaactgcttgctatgagatccttgaatgaaaaaata
cagtcgttaaaggagaaggaaataccacaattggagaaaagactgagtgatgtagacaag
aatatttctaccatatcggagtccgtggaagaaatctcgatgtccctaatggaaccggag
cagaagctgcagacagccaagcaggtcgcaggccacatgccactgatggatcagatgatt
actgaagtcaaaagtatcactaaaaatttagaagcaataaaggcccaatgcatcggcctt
gactccgatctcacgctagacgaagcgacagcgaaacaaactgacttgagacaaaagatc
agcacgcttcggacccgagtgaaaagtgctcagatgaaacttaacgcgcacgccaagaaa
ctccaggctaaggctgaagctaaaaataagttgaaggaggaatatcttaatatacagaaa
aaggtgcaagagttacataatctgcaagaaactcttaaacaatataaagaaaacatcgaa
aaatacgctctagaactgaggcagctacaagatgctactggagcgctgaaagcagaaaag
aaagagagagaagatgccaagactgaaacagtgaagaagaatagaaccgcaatcgacaca
aagcgaaccttcatcaccaaaatcttaaactcgttcgacaaagtgaagacagtcataaac
gaaataaaacaacacgaagagaagaacatccagcgagaaatggataagataaaagaagcg
aatgagcggttgatggaacagcataagcagatcgtggtggaaagagacagggttactaag
agaattgactcattgagggacgaattggctaaacaggagagttacaaacgtaatttagaa
gataatctcaaactaaggaaagcccaaacggaaataactagctgtgataaagaattagct
gaaatctctgagaagatgagcggagttaatatggatatgatctcggaaaagggaccttta
atcaataaacatacgcagctgttgagagaaaaagctcaaacagagggagagttgaaagaa
attaagaaaagactgcaacaaaatagactagaactaaagaaagctctgaataaggacgta
gaaaagaaatatagggaaaagttctacgagatgaaagtgacacaggcattagacaaagac
attaaagagtattctgcggctttagaaaagtgtctcatggagttccatagagaaaagatg
gagaacatcaatctcattataagggaaatgtggaggaagatatacaggggaaacgatatt
gactacatagagataaagactgaatcaagcatgtcagcagacatggaaaggcggaaatat
gattatagagttgtacaaagtaagaataacgttgaaatcgatatgagggggcgatgcagt
gccggacaaaaggtgttagcctgcctcatcataaggttggctctcgcagaaacgtttagt
tccagattcggtatcctagctttagacgagccaacaacaaacctagacgcagagaacgtg
cggagcctctgcgccgcgctcggcgagatagtccaagagcgcatgcgccaaaagaacttc
atgttcatcatcattacgcacgacaaggagttcatcgagtccctcggcaacgtcgacaag
gtcacgcattactacgaggtctctaggaacgatgaggggaaatctaggctcaagaaaatt
aggttcacttga
DBGET
integrated database retrieval system
