Leguminivora glycinivorella (soybean pod borer): 125230301
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Entry
125230301 CDS
T09956
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125230301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgly03400
]
125230301
DNA repair and recombination proteins [BR:
lgly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125230301
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
CTF3_C
Motif
Other DBs
NCBI-GeneID:
125230301
NCBI-ProteinID:
XP_047991391
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All DBs
Position
1:complement(7430029..7463129)
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AA seq
1121 aa
AA seq
DB search
MSKRNSVGPSNTLFNYFTKTPPANKKAKPAENGDKNQDLDVLKKEIEVKIESKKRDRQIT
PSPEVKQEARSDDDEPIAPKKRKRIRLNPLDSDDSDTENKVDNIIETPKEKTALGKKLND
SFKYEANQSPKPTSKSTKKPAATNGLGPIKTETADELPVSDDGNWVHCKLDWLRPDKIRD
ANKRKPDHPDYDPSTLFVPTDFMNNQTPAHRQWWQMKSSHYDCVLFFKVGKFYELYHMDA
AVGVNELGFSYMKGDFAHSGFPESAYARMANTLVSKGYKVARVEQTETPDMMQDRCKKLG
QTSKFDKVVRREICQVTLRGAHAAGLQDPGPAEPGADYMLCVAEEESNGISTYGVCFVDA
SIGLFHLGQFKDDKHSSRLLTTLAHFPPALIVYDRRTTTARTSKLLGTHCHRARREPQVL
WQPEKTLKTLAENYYKTNADGDWPEGLKPFLHEGDALGLTPAPNCYLAIKALGGCIAYLS
QCLLDIQVLGMSQFESFAPPDVLNKTLSQELKVENKWEGGSTMVLDAITLRNLRIVQDEG
CLYDKLNFCATAMGKRLLYQWVCAPSCNLAVIKERQAAVKELFENQELSQDAKNILTTLP
DLERLLAKVHTLGNLKRSTSHPDSRAIFYEEKTYSKRKVLDFIAVLNGFQSALKLVELFD
DAESGLLKKLTKFSPHGKFPDYRDTLKFFKEGFNQAEAEKEGRILPGAGVDPEYDNTLQL
IEDIQKELNEYLAEQEKYFKCRLKYVGTDKKRYQIEVPESATKRATSDYHMEGARKGFKR
FSTSETKDLLARMTAAEEQKRDVLKDLSRRMFEKFSSNHAYWDAAVQCVAVLDILLALAE
FARQQSGDVCLPSVTFDPEQKPFITIVDGRHPCIPVAEFIPNDTTLGGDAALLLLTGPNM
GGKSTLMRQLGLLTVLAHLGSYVPASECSLSLVDRVFTRLGAADDILSGQSTFLVEMNET
AAIVKHATVHSLVLLDELGRGTSTYDGTAIASGVCVELAERGCRVVFSTHYHSLVHHLAS
HPGVVLGHMACMVETDESTADSDDIPEETITFLYKLSPGACPKSYGFNAARLAGIPKDIT
RRAHQISKNLEKEATCVRAFRDIVKMEDAKQIRELLAALSI
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgcaacagcgtcgggccttcaaataccctattcaactattttactaaaaca
ccgcctgccaacaagaaagcgaaacccgcagaaaatggtgacaaaaaccaagacctcgac
gtattaaaaaaagagattgaagtgaaaattgagagtaagaaacgtgacagacaaataacg
ccctcacctgaagtgaagcaggaagcacgtagtgacgatgatgaacctatcgctcctaag
aaacgaaagaggatcagactcaatccactggattctgacgattctgatacagagaataaa
gtagataacataatcgagacaccgaaagagaagacagcattggggaagaagttgaatgat
agcttcaagtatgaagccaaccagtcaccaaagcccaccagcaagagcactaagaaaccg
gctgcaactaatgggctaggccctataaagactgagacggcagacgagttaccagtcagc
gacgatggcaactgggtgcactgcaaactggactggctccggccggacaagatccgcgac
gctaataagaggaaaccggatcatccggactatgatccgtccaccctctttgtgccaacg
gatttcatgaataatcagacccctgctcatcgtcaatggtggcagatgaagtcgtcacat
tacgactgcgtcctcttcttcaaagtcggcaagttctacgaactgtaccacatggacgcc
gcggtcggcgtcaacgaactcggattctcttacatgaagggtgatttcgctcactccggt
ttcccggaaagcgcgtacgctcgaatggccaatacgttggtctctaaagggtacaaagtg
gcccgagttgagcaaacggaaacgcctgatatgatgcaggacaggtgcaagaaactgggt
caaacgtcaaagttcgacaaagtagtgcgtcgtgaaatatgccaagtgacgctccgtggg
gcgcacgccgccggtctgcaagacccgggtccggccgagcctggcgccgactacatgtta
tgtgtagccgaggaggaaagcaacgggatcagtacatacggcgtgtgcttcgtcgacgct
tcaataggtttattccatctgggtcagttcaaggatgacaaacattcctcaagacttctc
actactctggcgcatttcccgcctgcgttaatcgtatacgaccgtagaactaccacagcg
cggacgtcaaagttgctcggtacgcattgccaccgcgcgcggcgcgaacctcaagtgcta
tggcaaccggagaaaacactcaaaacgcttgccgagaactactataagactaacgccgat
ggggattggccggaggggttaaagccgttcttgcacgaaggtgacgccttaggtttaact
ccagccccaaactgttacctggccatcaaagcactaggcggctgcatcgcctacctctcg
caatgcctcctcgacatacaagtactaggcatgtcacagttcgaatccttcgcgccgccc
gatgtcctgaacaagaccttatcgcaagagctcaaggtggagaataagtgggagggcggc
agtaccatggtgctagatgctatcacgctgagaaatttgaggatagtgcaggatgagggc
tgtctgtatgacaagttgaatttctgtgccacggctatggggaaaagactgctataccag
tgggtatgcgcgccaagctgcaacctggctgttataaaggaacggcaggcggccgtcaag
gagttattcgagaaccaggagctaagtcaggacgcgaagaacattctcaccacgctgccg
gacttggaacggcttttagcgaaagtgcacaccctcggcaacctgaagcgctcgacatca
caccccgactcccgcgcgatcttctacgaagagaagacctactccaaacgaaaagtcctc
gactttatcgcggtcctcaacgggttccagtcagctctcaaactagttgagcttttcgac
gacgcagagagcggactattgaagaaattgaccaagtttagtccgcatggaaagttcccg
gattatagagatacgttgaagtttttcaaggaagggttcaaccaagccgaagccgagaag
gaaggtcgcattttacccggcgcgggcgttgaccccgagtatgataacactcttcaactt
attgaagatattcagaaggagctcaacgagtatctggctgaacaagagaagtactttaag
tgtcggttgaaatatgtggggacagacaagaagcgttatcagatagaagtaccagagagc
gctacgaaaagggcaacttctgactaccatatggaaggtgcccgaaaagggttcaagagg
ttttctactagtgaaactaaggatctcttagcccgtatgacggcagccgaagagcaaaag
cgcgacgttttaaaagatctgagtcgtcgaatgttcgagaagttttccagtaaccacgcg
tattgggacgccgctgtgcagtgtgtggcggttttagacatactactggctttagcagag
tttgcgaggcagcagagcggagatgtgtgtctgccgagtgtaacgttcgatccggagcaa
aagcccttcataaccatagtagacgggcggcacccgtgcatacccgtcgcggagttcatc
ccgaacgacacgactctaggcggagatgcggcacttcttctactgacggggccgaatatg
ggcggcaagtctacactcatgaggcagttaggactgctcactgtattagcgcacttgggc
tcatacgtcccggcatcagaatgcagcctaagcctagtggaccgcgtgttcacgcgtctc
ggcgcggccgatgacatcctatcgggacaatccactttccttgtggaaatgaacgagaca
gctgccatagtgaaacatgctacagttcactctttggtgctgttggatgaacttggtcgc
ggcacatcaacctatgacggaaccgccatagcgtcgggtgtgtgcgtggagctagccgag
cgcgggtgccgcgtggtgttctctacgcactaccactctctcgtgcaccacctggcgtcg
cacccgggagttgtgttgggacacatggcgtgcatggtggaaaccgacgagtccacagcg
gacagcgacgatatccccgaggagaccatcaccttcctctacaagctgtctcccggcgcg
tgtccgaagtcctacggcttcaacgcggcgcgtctcgccggcataccgaaggatataacg
cgcagggcgcaccagatatcgaagaatctagaaaaggaggcgacttgcgtgcgggccttt
agggatattgtcaaaatggaggatgcgaaacagattagggaactactagcggccttgagc
atttaa
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