Leguminivora glycinivorella (soybean pod borer): 125230329
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Entry
125230329 CDS
T09956
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125230329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125230329
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125230329
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125230329
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
125230329
NCBI-ProteinID:
XP_047991420
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All DBs
Position
1:8518253..8533282
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AA seq
437 aa
AA seq
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MRNQRPYFDKHLARNDQRQVMANLNFQQAPRSLASGGVGGRVGSGLVGGVSGHVTPTFGG
ALSPGRGATAMPGGAPPSMASRSTLFGQRAFADRRVPMPTPLSQPNSNAMSSMGNLSRFN
AGSNYHSVFGEGGDTSTPPLLDLSEFPSLTARGAGDQAPAAAPPPPGSKPYVGMVKQPTS
EQSEFTMSSEDFPALPGTSAGGAAAGALGAGAALHDHNHAPDKPRKGIQTEPEVVNQGAH
TEFYGKVTNIPETMIPNQFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLY
LTFAGPWADTPCRPQDMDYHVPPEYLINGSIREKLAPLRLSRYKEDLLFYLFYCFVGDVL
QIAAAAELYNREWRYHMEEKVWISQAPGMPMVEKTPTYERGTYYFFDAHNWRKVAKEFHL
DYSKLEGRPQLPPHVLT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaccaacgcccgtactttgacaaacatctagcaagaaatgaccaacgccaggtt
atggcaaacttgaatttccagcaagcgcctagaagcctagccagtggcggggtgggaggc
cgcgtgggctcggggctggtgggcggcgtgtcgggccatgtgacgcccacgttcggcggc
gcgctgtcgcccggccgcggcgccaccgccatgcccggcggcgcgccgccctccatggcc
tccagatccacactcttcggacagcgggcgtttgcagaccgaagggtaccgatgccgacg
ccactatctcagcctaattctaatgctatgtcaagtatgggcaacctgtcccgcttcaac
gccggcagcaactaccactcggtgttcggcgagggcggcgacacgtcgacgccgccgctg
ctcgacctcagcgagttcccgtcgctcaccgcgcgcggcgccggcgaccaggcgcccgcc
gccgcgccgccgccgcccggctccaaaccgtacgtgggtatggtgaagcagccgacgtcg
gagcagtcggagttcacgatgtcgtccgaggacttccccgcgctgcccggcacgtcggcg
ggcggcgcggcggcgggcgcgctgggcgcgggcgcggcgctgcacgaccacaaccacgcg
cccgacaagccgcgcaagggcatacagaccgagcccgaagttgtcaatcaaggagcgcat
acggaattctatggtaaagtgacgaacataccggagacgatgatcccgaaccagttcggt
atcgtggggctgctgacgttcatccgcgccgccgagtccgaccccagcctcgtgtcgctg
gcgctggggcaggacctcacggcgctcggcctcaacctcaactcgcccgacaacctctat
ctcaccttcgccggtccctgggcggacactccctgcagaccacaagacatggactaccac
gtaccccccgagtatctgataaacggctccatcagagaaaagctggcgccgctacgactg
agtcgatataaggaagacctattattttatttgttctactgttttgtcggggacgtcctg
cagatagcagccgccgccgaattatacaaccgcgagtggcggtaccacatggaggagaag
gtgtggatctcgcaggcgcccggcatgcccatggtggagaaaacgcccacctacgagcgc
ggcacctactatttctttgacgcgcacaattggcgcaaggtggcgaaagagttccaccta
gactacagcaagctggagggccgaccgcagctgccgccgcacgtgctcacgtag
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