Leguminivora glycinivorella (soybean pod borer): 125230457
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Entry
125230457 CDS
T09956
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03022
Basal transcription factors
lgly03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125230457
09124 Replication and repair
03420 Nucleotide excision repair
125230457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgly03021
]
125230457
03400 DNA repair and recombination proteins [BR:
lgly03400
]
125230457
Transcription machinery [BR:
lgly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125230457
DNA repair and recombination proteins [BR:
lgly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125230457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
125230457
NCBI-ProteinID:
XP_047991556
LinkDB
All DBs
Position
1:15243790..15261618
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AA seq
573 aa
AA seq
DB search
MTTSSEDVLLSVSYVRYKKGDGTLYVMNQRLAWMLENRDTVAVSHKYADIKTQKISPVGK
PKVQLQVVLHDGTCSTFHFVNPAGPDAQAKDRDQVKGLLVNLLPKFKRQIDGELEMKSRL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKHYTESNNVKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKLDDHAIASAMKHTTLDLTVDLPKFTEPIPLLPTEDDAPVQKDKGDSTSIHR
NMIKRFNQHSIMVLKASQKTNSSSSDSNSKTTNNNNKVVENGVKETNGTAEKRPADEKSA
SEPVNKKKRILEKIHYEDLEDSNKNEEAQELKLSKIERYLLGPSSQVNQSSSSTNHPPPL
SALASICQAWSSGQQCSRPIRVGAAGCVAALGELSPGGALMRQHHAAAMAQLIPADVKAE
LNRLYLSAGELLRELWRCFPAPATPAQEADSARAENFYEALLRFRNVKLRPFEEKMLHDL
TPLATSLTKHINQMIDVACTKYAVWQQRQAKLR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtcttcggaagatgttttgttgagcgtaagctacgtacgatataagaagggt
gacggtaccttgtatgtgatgaatcagaggttggcatggatgctggaaaatagagacact
gttgctgtatcgcacaaatatgctgatattaaaacacaaaaaatatctccagtgggcaaa
cctaaagtgcaactgcaagtagtcctccatgatggaacatgttctactttccactttgtc
aaccccgcgggcccagacgcgcaagccaaggaccgagaccaggttaaaggcttgctggtg
aatctgttacctaagtttaagaggcaaattgatggagagctagagatgaaatccaggctc
ttgtctcttcacccaactctgaagcatttatatgaagacttagtaatatcaaaagtgatt
aatagtgaagaatattggaacacacccacattgaaacattacactgaatctaataatgtt
aaacaggaagcgggtgtttctggagcttttctggcagacatccagccgcaaacagatggc
tgcaatggcctcaaatataatctcacacaggatataatagacgccatattcaaaacatat
ccagccgtcagaaagaaacatatagactatgtgcccaataagatgactgaagcagaattt
tggaccaaattctttcaatctcattattttcacagggaccgcatagcgtcatcatccagc
aaagatttatttggagaatgtgcaaaactagacgaccacgccattgcctcagctatgaaa
cacacaactctggacctcacggtggatctgcctaaatttacggaacccattcccctgtta
cccacagaagacgacgccccagtacagaaagataaaggtgacagcacgtccatacatagg
aatatgatcaaacgattcaaccaacattctattatggtgctcaaagctagtcaaaaaaca
aattctagtagtagtgatagcaatagtaaaactacaaacaataacaataaagtggtagaa
aatggggtcaaggaaacgaatggcactgccgagaagaggccagctgatgaaaaaagtgct
tcagagcctgttaataagaaaaaaaggatattagagaagatacattatgaggatctagaa
gattcgaataaaaacgaagaagcacaggaattaaaattatcgaagattgaaaggtatcta
ttaggaccatcgtcgcaagtaaaccaatccagttcgagtacgaatcacccaccgcctttg
tcggccctagcttcaatatgtcaggcatggtcgagtggtcagcagtgctcgcggccgatc
cgcgtcggcgcggcgggctgcgtagccgcgctcggcgagctcagtcctggcggcgcgctc
atgcggcagcaccacgccgccgccatggcgcaactgatcccggccgacgtgaaagcggag
ctgaaccgtctgtacctgtccgcgggcgagctgctccgcgagctgtggcgctgcttcccc
gcgcccgccacccccgcgcaggaggcggacagcgcgcgcgcagagaacttctacgaggcg
ctgctgcggttccggaacgtcaagctcaggccgttcgaggagaaaatgctgcacgacctg
acaccactagcgacatcactcacgaaacacatcaaccaaatgatagacgtggcgtgtacg
aagtacgcggtttggcagcagaggcaagccaagcttcggtag
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