KEGG   Leguminivora glycinivorella (soybean pod borer): 125230541
Entry
125230541         CDS       T09956                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit Rpb4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
lgly  Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03020  RNA polymerase
lgly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lgly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125230541
  09124 Replication and repair
   03420 Nucleotide excision repair
    125230541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lgly03021]
    125230541
   03400 DNA repair and recombination proteins [BR:lgly03400]
    125230541
Transcription machinery [BR:lgly03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     125230541
DNA repair and recombination proteins [BR:lgly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125230541
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 125230541
NCBI-ProteinID: XP_047991679
LinkDB
Position
10:complement(10045220..10046263)
AA seq 138 aa
MSGPLQDILEEDAADLRFPKEFENAETLLISEVDMLLEHRKAQNESAEEEQEFSEVFMKT
LTYTNMFKKFKNKETITAVRNLLQVKKLHKFEIASLANLCPETPEEAKALIPSLEGRIED
EELRILLDDIQTKRSLQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggaccattacaggatattcttgaggaagacgccgccgatttacggtttcccaaa
gagtttgaaaacgcagagacattgctgatatctgaagtagacatgttactagagcacaga
aaggcacaaaatgagtctgccgaggaggaacaagaattctcagaagtatttatgaagacg
ctgacatacactaacatgtttaagaaattcaaaaataaagaaactattacagcagttcgg
aaccttctacaagtaaaaaagctacacaaatttgaaatagcaagtttagccaacttgtgc
ccggagacccctgaagaagcaaaagctttaattccttcactagaaggccggatagaggat
gaagaacttagaatattgctagatgacatacagaccaaacgcagtttacagtattag

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