Leguminivora glycinivorella (soybean pod borer): 125230830
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Entry
125230830 CDS
T09956
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125230830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgly03041
]
125230830
Spliceosome [BR:
lgly03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
125230830
Complex C
U5 SnRNP specific factors
125230830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_16
TPR_17
FAT
TPR_CcmH_CycH
ARM_TT21
TPR_21
TPR_12
NatA_aux_su
DUF6525
Motif
Other DBs
NCBI-GeneID:
125230830
NCBI-ProteinID:
XP_047992017
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Position
11:15646647..15665911
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AA seq
929 aa
AA seq
DB search
MSVPPQAFVNKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPA
AKRKKNEEEDDDEDLNDSNYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKRKE
YREKRLKEDLERYRQERPKIQQQFSDLKRELKTVSEDEWSAIPEVGDARNRKQRNPRAEK
FTPLPDSVLSRNLGGESTSSIDPNSGLASMMPGVMTPGMLTPSGDLDLRKIGQARNTLMT
VKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAW
IASARLEEVTGKVQSARNLIMKGCEVNPSSEELWLEAARLQPSDTARAVIAHAARNLPHS
VRIWVKAADLEQEPKAKRRVYRKALEHIPNSVRLWKAAVELENPEDARILLSRAVECCPT
SVELWLALARLETYENARKVLNKARENIPTDRQIWVTAAKLEEAHGNTHMVEKIVDRAIT
SLSTNGVEINREHWFKEAMEAEKSGAVHTCQAIIRSVIGQGIEQEDQKHTWMEDAEACAN
EGAYECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLEALLQRAVAHCPKSEVLWL
MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENKEYDRARRLLAKARASA
PTPRVMIKSAKLEWALNNLEVALKLLEEAIKVFGDYAKLHMMKGQIEEQMGKDEDAHNTY
TQGLKKCATSVPMWILLSRLEEKLKHITKARSVLEKARLRNPKNAELWLESVRLERRNGS
AEIANAVMAKALQECPTAGRLWADAIFMESRPQRKTKSVDALKKCEHDAYVLLAVSQLFW
TERKLNKCREWFNRTVKIDADFGDAWAYFYKFELLHGNEQQQEEVKTRCKTAEPRHGEYW
CKHAKDIQNWCFSTEQILLLVAKNLPVPT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgccaccgcaagcgtttgttaataaaaacaagaagcattttctcggaatccca
gcacctttaggttatgttgctggtgttggcagaggagcaaccggtttcactactcgatct
gatatcggtcccgctcgtgatgccaacgacgtatctgatgaccgacacgcaccacctgct
gcgaaacgcaagaaaaacgaggaggaagatgatgatgaagacttgaatgattctaactat
gatgagttctcaggatacagtggatcactcttctcaaaggatccatacgacaaagatgat
gcagaagctgatgctatttatgagtcaattgacaaaagaatggatgagaaacgaaaagaa
tatagagaaaaacgactcaaagaagacttggaaagatatcgccaggaaagaccaaaaata
caacagcaattttctgacctaaagcgagaactgaaaactgtctcggaagatgaatggtca
gcgattcccgaagtaggtgacgcacgtaatagaaagcaacgtaaccctcgtgctgagaag
tttaccccgctgccggatagtgtactatccaggaatttgggaggagaatccacgtcgtcc
attgatccaaactcgggcttggcttctatgatgcctggtgttatgactccagggatgttg
actccatctggtgacctggacttgcgaaagatcggtcaagccagaaacacacttatgacc
gtcaaattatcacaggtttctgactcggtcaccggtcaaacagtggttgatcccaaaggc
tacctcactgatctacagtcaatgataccaacctacggaggagatattaatgacataaag
aaagctaggttgctgctaaagtctgtgcgagagacaaatccaaaccacccgcctgcttgg
attgctagtgctagattagaggaagtcactggcaaagtacaatcggcccgtaatctcatt
atgaagggttgcgaagtgaacccgagtagcgaagagctttggctagaagcggccaggttg
caacctagtgacactgcccgcgctgtcatagctcatgcagccaggaatctaccgcacagt
gtgaggatctgggtgaaggcagcagatttagaacaggaacctaaggctaaacgacgagtt
taccgcaaagctctcgaacacatccccaactcagtccgtctctggaaggccgcagtcgag
ctagaaaaccctgaagacgcccgcatcttactctctcgcgccgtagaatgctgccccact
agtgtagagttgtggcttgctttggcaagattggaaacgtacgaaaacgctaggaaggtc
ttgaacaaggctagagagaatatacctacagatagacagatttgggtgactgctgctaaa
cttgaggaggctcatggcaacacccacatggtggaaaagatcgtagaccgagcgatcaca
tcgcttagcaccaacggagttgagatcaaccgcgagcactggttcaaagaagctatggag
gccgagaaatctggcgcggttcatacttgccaggcgataatcagatctgttattggacaa
ggcattgaacaagaggatcagaaacacacttggatggaagatgcggaagcgtgcgcaaac
gaaggcgcatatgaatgcgcccgcgcagtctatggctacgcgttgtcagtgttcccttca
aagaagtctatttggctacgcgccgcgtacttagaaaaacaacacggcacgcgcgcaagt
ttggaggctttgctgcaaagggctgttgcacattgtccaaaatcagaggtcctgtggctt
atgggagctaaatccaaatggctggctggtgatgtcccagcagcccgtggtatcctgtcc
ctggctttccaagccaatccaaactcggaagagatttggctcgctgctgttaaactcgag
agcgagaacaaagagtacgacagagcgagacggctgctggccaaagctagggcatcggct
cctacgcctagggtcatgataaagtccgccaaattggaatgggcgctcaacaacctagaa
gtagccttgaaacttctagaagaggccatcaaagtgttcggcgattacgcgaagctgcat
atgatgaaaggacaaatcgaggaacagatgggcaaggatgaggacgctcataacacttat
actcaggggttgaagaaatgcgcaactagcgttcccatgtggatattactttcaaggctg
gaggagaaattaaaacacatcaccaaagccagatcagttctcgagaaggctagactaagg
aacccaaagaatgctgagctatggttggaaagcgttcgtctagagaggcgaaacggcagc
gcagaaatagcaaacgctgtaatggccaaggctctgcaagaatgtccgaccgcgggccgc
ctgtgggccgacgccatattcatggagtcgcgaccgcagaggaagaccaagagcgtggac
gcccttaagaaatgcgagcacgatgcttacgtgttgctggctgtatcacaactcttctgg
actgagaggaaactgaacaagtgccgggaatggttcaaccgaacggtgaagatcgacgct
gacttcggagacgcctgggcgtacttctacaagttcgaattactccacgggaacgaacaa
caacaggaggaagtcaagacccgctgcaagaccgcagaaccgcgccacggagaatactgg
tgcaagcacgcgaaggatattcagaactggtgctttagcacggaacagattttattgtta
gtggctaagaacttgcctgtgcctacgtga
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