Leguminivora glycinivorella (soybean pod borer): 125230993
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Entry
125230993 CDS
T09956
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125230993
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125230993
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_4
PRORP
RuvA_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
125230993
NCBI-ProteinID:
XP_047992271
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Position
11:complement(15680555..15713616)
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AA seq
576 aa
AA seq
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MSHDTDLFISVPRSCITEFYSKYLNLVETFYYVTLSENKSAAAKEKPEYVYFHVLFNLSP
ADGNFNPREIVGRIQKYVESSLGWAGERGEDSSYDSECEDESGHRAASRTPSDTLAAEFA
EYVTLGPPPPQPNQAKIEFAVKLGYSERLARTALQRLGPDPPRNELLAELIKLASKQPPR
PLSPSPPAEPDPPIDRSPLRHIVIDGSNVAMSHGNKEVFSCRGIEICVDWFRARGHRDIT
VFVPKWRKEASRPDNPVADRDSLERLERDRVLVYTPSRQVGGKRLICYDDRYVLKLALDT
DGIVVSNDNYRDLVAENPGYRKIVEERLLMYSFVNDRFMPPDDPLGRSGPTLDAYLRCPP
ARIDPALTPPACPYGRKCTYGNKCKFHHPERAGRPHKSVAEKLSERAARALKARDLHTLS
LPPGGRPAEIKRPLARAHSAAPRISDAALATHFDRAQMLPGPSQPDTNPHRKLARQLTLN
PACDPRLHPAAARVASAPVGAAAALNPGPMVSPCSSEGALQHWEARRRMHFHLAGIFPEA
QVAEAMATYPEETDPQTMCAIILARYRPSESRVPPH
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatgataccgatctattcatatcagtgccgcgatcgtgtataacagaattttac
agcaagtacctcaatttagtagaaactttttactatgtcactttatcggagaataaatca
gctgctgccaaagagaaacctgaatatgtgtacttccatgtattattcaacttgagccca
gcggacggaaactttaatccacgagaaatcgtcggacgtattcaaaaatatgtggagtca
tcccttggctgggcaggcgagcgtggcgaggactccagctacgactcggagtgcgaggat
gagagcggccaccgcgccgcttctcgcacgccgtcggacactctcgcggcagagttcgcg
gagtacgtcacgctcggcccgccgcccccacagcctaaccaggctaagatcgagttcgcc
gtaaagctggggtactcagaacgccttgcgcgcacggcactccagcggctcgggcccgac
ccgccgcggaacgagctgctggcggagctcatcaagctcgcctccaaacagccgccgcgc
ccgctgtcgccgtcgccgcccgcggagcccgacccgccgatagaccgcagcccgctgcgg
catattgttattgatggcagcaatgttgctatgagccatggcaacaaggaggtgttctcg
tgccgcggcatcgagatctgcgtggactggttccgagcgcgcggccaccgggacatcacc
gtgttcgtgcccaagtggaggaaagaggcgtccagaccggacaacccggtcgccgaccgg
gactccctcgagagactcgagagggaccgcgtgctcgtgtacacgcctagcaggcaggtc
ggcggcaaacgtctcatctgctacgacgaccgttacgtcctcaaactggccttagacacc
gacggcatcgtagtctccaacgacaactacagagacctcgtggcagaaaaccccggctat
agaaaaatcgtcgaagaacggctactcatgtactcgttcgtgaacgaccgcttcatgccc
cccgacgatcccctcggtagatccggcccgacactagacgcgtacctccgttgcccgcca
gcgcggatagacccggccctcacgcctccggcctgcccgtacggcaggaagtgcacgtac
ggcaacaaatgcaagttccatcacccggaacgcgccgggcggcctcataaatccgtcgcc
gagaaattatcagagcgtgccgcgcgagcgctcaaagctcgcgatcttcacacgctcagt
ttgccgcccggcgggcgtccggctgaaatcaaacggccgttagcgagagcgcactccgcc
gcacccagaatatctgacgcggcactcgcgacacactttgatcgagcccagatgcttccg
gggccttcccagccggacaccaatccccatcgtaagctcgcgcgccagttgactctgaat
cccgcctgcgacccgagactgcacccggcggcggcacgagtggcatccgctcccgtaggc
gcggcagcagctctcaatccggggccgatggtctccccttgctcttctgaaggagcctta
caacactgggaagccagaagacgcatgcacttccacctggcgggcatcttccccgaagct
caagtggcggaagctatggcgacgtacccggaggagacggacccgcagaccatgtgcgcg
atcatcctcgcgcgctacaggcccagcgagtcgcgggtgccgccacattga
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