KEGG   Leguminivora glycinivorella (soybean pod borer): 125231009
Entry
125231009         CDS       T09956                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
lgly  Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lgly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125231009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lgly03041]
    125231009
Spliceosome [BR:lgly03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    125231009
 Complex C
   U5 SnRNP specific factors
    125231009
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT122_1st NBCH_WD40 ANAPC4_WD40 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD_LRWD1 Cytochrom_D1 KNTC1_N WDR54
Other DBs
NCBI-GeneID: 125231009
NCBI-ProteinID: XP_047992297
LinkDB
Position
11:1037293..1048610
AA seq 348 aa
MPELEKRKADDYSVVPSKKTRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIF
TTRFHPEGKHLASAGFDRQIFVWNVYGQCENIMVMKGHTGAIMEINFSPDGSHLYSCATD
NTVAVWDVPTGTRIKKLKGHANFVNSCSGARRGPELLVSASDDNTIKLWDARKRNPIASF
DSEYPVTAVLFNDTAEKIISGGIDNVVKVWDIRTNKISYKIKGHTDTITGLALSYDGSYL
LSNAMDSTLRIWDVRAFAPTERCVKLLAGHHHNFERNLLRCAWSPDGSKVTAGSSDRFVH
VWDTTSRRVLYKLPGHRGAVTDAHFHPKEPIVLSASSDKLLYLGEIEP
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgcctgaattggagaaacgtaaagcagacgactattctgtcgtcccatccaaaaagacc
cgacatgaaatatcagtggttggaactagagaaaaagccgtggttacttcttcggtacca
cgcacatcaaacctctatgcgcctattatgctgctggaaggccaccagggagagatattt
acaaccagattccatcctgagggaaaacatttagcatctgctggctttgacagacaaatt
tttgtatggaacgtctacggacaatgtgagaacataatggtgatgaaaggccacacgggt
gccattatggagataaatttctccccagatggctcccacttatactcgtgtgctacggac
aacacggtggctgtgtgggacgtcccaactgggactaggattaagaagctgaagggacat
gctaattttgtaaactcttgttcaggagcccgtcgcggccccgagctcctagtctcagcc
tcagacgacaacaccatcaaactgtgggacgccagaaaaaggaaccccattgcctccttc
gacagcgagtacccggtcacagcggtcctcttcaatgatactgcggagaagatcatatcg
ggaggcatagacaatgtggttaaagtctgggatattaggactaacaagatctcgtataag
attaaaggacatactgatacaattacaggtctagcgctctcctacgacggttcctacctc
ctatcgaacgcgatggacagtacgctccgcatctgggacgtgcgcgccttcgcgcccacc
gaacgctgcgtcaagctgctggccggacaccatcacaacttcgagaggaacctgctgcgg
tgcgcgtggtctcctgacggctccaaggtgacagcgggttcatcggatcgcttcgtgcac
gtgtgggacacgacctctcgccgcgtgctctacaagttgccgggacaccgcggcgctgtt
actgacgctcacttccatcctaaagaacctattgtactgtccgctagtagcgataaactg
ctctacctcggggagatagagccatag

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