Leguminivora glycinivorella (soybean pod borer): 125231181
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Entry
125231181 CDS
T09956
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125231181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125231181
03012 Translation factors [BR:
lgly03012
]
125231181
Enzymes [BR:
lgly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125231181
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125231181
Translation factors [BR:
lgly03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125231181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_N
OB_NTP_bind
HA2_C
nSTAND3
Cas3-like_C_2
AAA_19
AAA_22
NB-ARC
NPHP3_N
NACHT
RsgA_GTPase
AAA_14
AAA_11
ABC_tran
PhoH
ATPase_2
AAA_16
nSTAND1
AAA_23
Motif
Other DBs
NCBI-GeneID:
125231181
NCBI-ProteinID:
XP_047992502
LinkDB
All DBs
Position
11:complement(13676881..13687400)
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AA seq
1066 aa
AA seq
DB search
MSNNWQRGRKNKSWGNFKKQSSHPPHLKGKAIGLFYRDQAAKRNGEKKERRDIHMVLNIP
SAVMYRLSSDIQAIEELAHKQNITLRKSEMYIKEEPMSDSSFESEKIAIKCEDIVKDEYD
SQAGPSSSKESSSEGIFKTPKAPSRKHPPAECSDYIQVKTEPTEDYESSTERTLHLRDQS
HYKYGYQDIITGAFDEKLDENLAKGIHICTNTQENYDMSVAMHEEYKDMVTRNQYKSMLG
FREKLPTYKKSAELLELINNNQVVVISGETGCGKSTQVPQIILDDAIRKNQGAYIHILVT
QPRRIAASSLASRVAQERAESLGNSVGYAVRLEKTDARPRGSIMYVTTGILLADLEVNQG
LTNYSHIILDEAHERDCHMDFSMCMLKLVLRKRQDLKLILMSATIDSDRLSAYFDNCPTM
HIEGLAYPVQPLYLEDVLALTGYQLPTENKRNSGPAKRGRGGQWKQMKIERNQMERDVQY
RAEISPWLESIKRKIDRNVYVSLQDSRIEDLNIDLILALLTHISKGLPGAVLVFLPGIGD
ISKLVKMMNDSGMFPSSQFEIYPLHSKLPTLDQHKIFARPPQNIRKIIIATNIAETSITI
DDIVYVVDCGRIKMTGLNVETNVSTLKTDFESKANLMQRRGRAGRCQPGIAYHLLTSYRA
QNIPDRLLPELQRSNLLEPVLQIKKLRLGNAQDAFKLVPGPPAEVTVDKAVRHLQQLGAL
DGEERLTPLGWHLARLPVHPAAGKLLLFGALFGCVDRAASVAAVWGFKDPFILVIGKQQE
VDDAKRSLALGEPSDHVAISEAIIQWERLDRRAKSNFAYDYFLSYNTLQLLSEMKQQLCE
NLRQMGFLASANVRGSWENRNKDNLCVFKAIMAAALYPNIGTVRWTHSRNPQKPQRIKVS
TPEDGKIQIHPSSVMSSNFKPNRGPLCDKPGANWLVYWLKQKSSDLFLFDVTLVYTLPLL
FFGELVVSNVEDSPNECYMSVSTVKVRCQKETADVLFKLRSLLDQVLASMVTENSERSTR
HSQFDELVFKAVIDVMTAEDERSEYMDYESDSGSDSGYHNRRYNHY
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaactggcaaagagggcgaaaaaataaatcttggggaaactttaaaaaacag
agttcacatccaccacatttaaagggcaaagctattggattattctacagagatcaggca
gcgaaaaggaatggtgaaaagaaagaacgcagggatatccatatggtactgaatatacca
tctgcagttatgtatagattatcctcagacatacaagctattgaggaattagctcataaa
caaaatataaccttaaggaaatctgaaatgtatattaaagaagaaccaatgtctgatagt
agttttgagtctgaaaaaatagcaataaaatgtgaagatattgtaaaagatgaatatgat
agtcaagctgggccgtcttcatctaaagaaagttcttcagaaggtatatttaaaactcct
aaagcacctagtagaaaacatcctccagcggaatgttctgattatatccaagtgaaaact
gaaccaaccgaagattatgaaagttccacggaaagaactcttcacttgagagatcaatca
cattataaatatggatatcaggatataataacaggcgcatttgatgaaaaattagatgag
aacctagccaaaggtattcacatttgtactaatacacaagaaaattatgacatgagtgtt
gcaatgcatgaagaatataaagacatggttacaagaaaccagtataaatctatgttgggt
ttccgtgagaaactaccaacctataagaagtcagcagagcttttagaacttatcaataac
aaccaggtggttgtgatcagcggtgaaactggttgtggaaaatctacacaggtaccacag
ataatcttagacgatgccatacgtaaaaaccaaggtgcctacattcacatacttgtgaca
cagcctagaagaatagctgcttcctcattagccagcagagttgcccaggagagagctgag
agtctgggcaactctgttggatatgccgtgcgattagaaaaaacagacgccagaccccgc
ggcagtatcatgtacgtgaccactggtatactcctggcggatttagaagtgaatcagggc
ttgaccaactacagccatatcatactggacgaggcccatgagagggactgccatatggac
ttctctatgtgcatgttgaaactggtgctcagaaaacgccaggacctaaagctcatccta
atgagcgctaccatagatagcgaccgactatccgcgtacttcgacaactgtccgaccatg
cacatagagggtctcgcgtacccagtacaacctctatacttagaggacgtactcgcccta
acggggtaccagttacccactgagaataagaggaactctggccctgcgaagcggggtcgt
ggcgggcagtggaaacagatgaaaatcgagaggaatcagatggagagagatgtgcaatat
agggctgaaattagtccttggctggaaagtataaaaagaaaaatagacagaaacgtatac
gtctcactccaagattcaagaatcgaagacctcaacatcgatttaatactagctcttcta
acgcacatatccaaaggcctgcctggcgctgtactagtatttctaccgggcatcggtgac
atatccaagctagtaaaaatgatgaatgatagcggaatgttccccagttcacagttcgaa
atatatcccctgcactcaaagctgccaacattagaccaacacaagatattcgcaaggcct
cctcagaatattaggaagataataatagcgacgaatatagcggagacttctattactata
gatgatattgtgtatgttgtggactgtgggagaattaaaatgacaggactgaatgtggaa
acaaatgtctcgacgctgaagacggattttgagtctaaagctaatttgatgcaaagacgc
ggccgcgccggtcgttgccaaccaggtatcgcctaccatcttctaacttcataccgcgca
caaaacatccccgaccgactgttaccagagttacaacgaagcaacttgctcgaaccagtg
ctgcaaatcaagaagttgcggctaggaaacgcgcaggacgcgtttaagttggtacctggt
ccacctgcggaggttactgtggataaagctgtcaggcatttgcaacagttaggcgcctta
gacggagaggaacggttgacccctctaggctggcacttagctcgattgccagtacaccca
gcggcaggcaaactgttgctatttggcgcactgttcggctgcgtcgatcgcgccgcttcg
gtagctgccgtctggggcttcaaagacccctttattctcgtcattggcaagcagcaagaa
gtagacgatgcaaagcgcagtctagccctcggcgagccgagtgaccacgtcgccatatcc
gaggccatcatccaatgggagcgcctcgaccgcagagccaaaagcaacttcgcttacgac
tatttcctatcatacaacactttacaactgctgtcggaaatgaaacagcaactgtgtgag
aacctgaggcaaatgggcttcttggctagtgccaatgttcgtgggtcgtgggagaatcgg
aataaggataacctgtgtgtgttcaaggccattatggcggctgcgctgtatccgaatatt
gggacggttagatggacacactctcgaaacccgcaaaaaccacaacgaatcaaagtctca
acaccggaagacgggaaaatccaaatacacccgagcagcgtcatgagttccaatttcaaa
ccgaaccgagggcctctgtgcgacaagcctggtgccaactggctggtgtattggttaaag
cagaaatcttcggatctgttcttgtttgatgtaaccctagtgtatactctgcctttgttg
ttctttggagagctagttgtcagcaatgttgaagactcccccaacgagtgctacatgtca
gtatcaactgtgaaagtccgatgccagaaagagacagcagacgtgctcttcaaacttcgg
tccttgttggaccaggtcctcgcctccatggtgacagaaaacagtgagaggtccacgagg
cacagtcaatttgacgaattagttttcaaggctgtgatcgatgtgatgactgcagaagac
gaaagatcggaatacatggactatgagtcggactctggatctgatagcggttaccataat
agacgctataaccattactaa
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