Leguminivora glycinivorella (soybean pod borer): 125231463
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Entry
125231463 CDS
T09956
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lgly
Leguminivora glycinivorella (soybean pod borer)
Pathway
lgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125231463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgly03019
]
125231463
03012 Translation factors [BR:
lgly03012
]
125231463
Enzymes [BR:
lgly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125231463
Messenger RNA biogenesis [BR:
lgly03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125231463
Translation factors [BR:
lgly03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125231463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_N
nSTAND3
HA2_C
Cas3-like_C_2
AAA_22
ResIII
AAA_19
ATPase_2
NACHT
NPHP3_N
AAA_11
AAA_14
NB-ARC
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
125231463
NCBI-ProteinID:
XP_047992891
LinkDB
All DBs
Position
11:complement(13688953..13707942)
Genome browser
AA seq
1255 aa
AA seq
DB search
MGKKNKQMRMEAKIKKVKNKLKKVKGQGRRGRYFSLFDSKNEEDDPQKQDLPSSGTRNSV
KGNSNIKKTLPQVVLDIPLVVIAQVVSDIKEIEKLAEKETIHLNTAQSFQRKTLSQPASQ
DPPPSGWMLGGYKRTPVNTSDFIPIQTKRQKNSNHGKSKWPARSHTPIETKLKPAPVESL
DFISFNSDNECKSQAKQTGIKVPAAKCSDYIYFKTEHNYEMERNVKPTPVESLDFISFKS
EAKCKSYSESQLPKETGTKTPPAKSSDFSSFKTETSEVPITKIENNGDSDHDSEPSPSTS
KCTNDDITTKVIKTKADFSDERIKELVPKHENEDIKTDIILIESDSDSDEVKCLPKREPI
RGGEHYKYGYKDIITGTFEEKLDESLAKNESICTKTKGNDCLSIALHEEFQDMITRPQFK
DMMVFRERLPAFRRSAELLDVLNNNQVVVISGETGCGKSTQVPQIILDNALCQNQGAYIH
ILVTQPRRIAASSLASRVAQERAEKLGNSVGYAVRLEKSDCRPRGSIKYVTTGILLADLE
VNQGLTNFSHIILDEAHERDSHLDLSMCVLKQVLENRNDLQLILMSATMDTQRLSTYFDD
CPVIHIEGLSYPVKDFYIEDILTMTGYRIPPVQGVTNDEDRNGNETTGGLSKQEKDRMYK
AKIDPWLKSFNGRLDKDVYTTLQDRRIEKLNFNLIIALLVHISRGPPGAVLVFLPGIHEI
FKLMRMINESEMFPQSNYHIYPLHSKLPTIEQHKIFKRPPRHIRKIIIATNIAETSITID
DIVYVVDCGRVKMKGMDVEHNISTLETEFESKANLMQRRGRAGRCQPGIAYHLMTSYRSQ
NIPERLLPELQRCNLLEAVLEIKKLRLGNAIDAFQLVPDPPANVTVENAVRHLQKLGALN
GEEQLTPLGWHLARLPVHPAAGKLLLFGALFGCLDRAASVAAVWGFKDPFKLILDKEYEI
NQAKRKLALGEPSDHVAISEGIIQWEQLDRENQSQFAQEHFLSENTLKLLSQMKCQLCGN
LRRMGFLASKNVRLSWENRNADNLYIFKAIVAAALYPNIAIVRWTNLHNPEKQTILNILT
PEDGRVQLHPSSMMFVPQRGPMVPLCNKPGANWLVYWMKQKSSELFLFDVTLVFTLPLLL
FGELAVSEVKDSPEECYLSASTVKVCCLKGTADVIFRLRNLLDQVLASMVEETSDRSTRY
SEFDNLVFKAVIDLMTLEDERPEGLEDEFSESDSSDCEVVCDMKPEDRYPVIVID
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaaataagcaaatgaggatggaagcgaagatcaagaaagtaaagaataaa
cttaaaaaagttaagggacaaggaagaaggggaagatattttagtttgtttgattcaaaa
aatgaagaagatgaccctcaaaaacaagatttaccaagtagtggaacacgcaattcagtg
aaagggaattcaaacataaagaaaactttgccacaggtggtactggatatacctttggtt
gtaatagcccaagtagtgtcagacataaaagaaattgagaagctggctgaaaaagagaca
atacatttaaatacagcacagtcttttcaaaggaagaccctgagtcaacctgcatcacaa
gaccctccgccaagtggctggatgctggggggatataagcgtacaccagtgaatacatct
gattttataccaatacaaacaaaacgccaaaaaaattctaatcatggaaagtctaaatgg
cctgccaggtcacatacaccaatagagacaaaattaaaacctgcaccagtggaaagcctt
gattttatttcatttaattcagataatgaatgcaaaagccaagctaaacaaactggtata
aaggtcccagcagcaaaatgttctgattatatttattttaaaactgaacataactatgag
atggagagaaatgtaaaaccgacaccagtggaaagccttgattttatttcatttaaatct
gaagccaaatgcaaaagctattctgaatcccagctgcctaaagagactggtacaaagaca
ccaccagcaaaaagttctgattttagttcgtttaaaactgaaactagtgaggtgccaatt
acaaaaattgagaacaatggagattctgaccatgacagtgaacctagcccttccacatca
aaatgtacaaatgatgatatcacaaccaaagttatcaaaacaaaagctgatttttctgat
gaaagaataaaagaactggtaccaaaacatgaaaatgaagatatcaaaactgatataatt
ttaattgaatctgactcagactctgatgaagtaaaatgtcttccaaaaagggaacccata
agaggtggggaacattacaaatatggctataaagacattataacagggacatttgaggaa
aaattggatgaaagccttgctaaaaatgaatctatttgtacaaaaacaaaaggtaatgac
tgtttgagtattgctttacatgaggagtttcaggatatgattactagaccacaattcaaa
gacatgatggtgttccgtgagcgattacctgcatttcggcgatcagcagaacttctagat
gttcttaataataaccaggtggtggtgataagtggtgagactggttgcggcaaatcaaca
caggtcccacagattatcctagacaatgccctatgccaaaaccaaggtgcctatatacac
atattagtgactcaacctagaagaatagcggcttcatcattagccagcagagttgcccaa
gagagggctgaaaaattgggcaattcggtcggatatgctgtgcgattagaaaaatcagat
tgcagacctcgtgggagcatcaagtacgtaactactggcatacttttggcagacttggaa
gtaaatcaaggtttaacgaacttcagccatatcatattggatgaggctcacgagagggat
agccatttggatttatctatgtgcgtgttgaaacaggtacttgaaaatcgtaacgattta
caacttatcctgatgagcgcaaccatggatactcagcgattaagcacttattttgatgac
tgccctgtcattcacattgaaggtctgtcatacccggtgaaagatttttacatagaggat
attttgactatgacaggatacagaattccaccagtccagggtgttacaaatgatgaagac
agaaatggaaatgaaacgacgggtggtctaagtaagcaagaaaaagacaggatgtataaa
gccaaaatagatccctggctgaaaagcttcaacggtagattggataaagatgtatacaca
acactccaagatcgaagaatcgaaaaattaaacttcaatttaattattgctcttctagta
cacatatctaggggtccaccaggtgctgtgctagtatttttacccggaatccatgaaata
ttcaaactaatgcgaatgataaatgaaagtgagatgttccctcaatcaaactatcatatt
tacccattgcattcgaaactgcccacaatagagcagcataagatattcaagagaccacct
cgacacattaggaaaataataatagctacaaatatagcagaaacgtctataactattgac
gatatagtatatgttgtggactgtggcagagtaaaaatgaaagggatggatgtggaacac
aacatttcgacactagagactgaatttgagtctaaagcgaatttaatgcaaaggcgaggc
cgcgcaggtcgttgtcagccaggcatcgcctatcacttgatgacgtcataccgctcacaa
aacatcccagaacgtcttttaccagaactacagagatgcaacttgctcgaggcggtattg
gagatcaaaaaactgcgtctgggcaacgcaatagacgcgtttcaattagttccagatccg
ccagcaaatgttaccgtggaaaatgctgtgaggcatttgcaaaaattaggtgctctaaat
ggtgaagaacagcttacccctctggggtggcacctcgctcggctgccagtgcatccagcg
gccggtaaactgcttttatttggtgcactatttggttgtctcgatcgtgccgcctccgtc
gctgccgtttggggcttcaaagaccccttcaagctcattcttgataaggagtacgaaata
aaccaagctaaacgcaagctggctctaggggaacctagcgaccatgtcgctatatcagag
ggaattatacaatgggaacagttagatcgtgaaaatcagagtcagttcgctcaagaacat
tttctctcagagaacacactgaaactgctgtcgcaaatgaaatgtcagctgtgtggtaat
ctgcgtcgaatgggattcttggcatcgaagaatgttcgcttgtcgtgggagaatcggaat
gcagacaatctgtatatttttaaagcgattgtggctgctgcgttgtatccaaatatcgct
attgttagatggacaaacctgcataaccctgagaaacaaaccatactaaacatcttaaca
cctgaagatgggagagtccaattgcatccaagcagtatgatgtttgttcctcaacgaggc
cctatggtaccgctgtgtaataagcctggggcaaactggctggtgtattggatgaagcag
aaatcttcagaattgttccttttcgacgtcacgctggtctttactttacccttgttgttg
tttggagagttggcagtgagtgaagtgaaagattctcccgaagaatgctacttatctgcg
tcgacggtaaaagtctgctgtctgaagggaacagctgacgtcatcttccggcttcgaaac
ttgctggaccaggtcctggcctccatggtggaggaaaccagcgataggtctacgcgttat
agtgaatttgataatttagtgtttaaggctgtgatagatctcatgacattagaagatgag
agacctgagggcttggaggacgaattctcggagtctgatagctctgactgtgaagtcgta
tgcgacatgaagcctgaagatcgttaccctgttattgttattgattaa
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